Search result

BaseInfo

ncRNA ID ath_circ_027179
Species Arabidopsis thaliana
Class circRNA
Genome position 5:14684300-14684996[+]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence CTCCATGGGAAAGAAATCAGCGGCTGTAGATCTCATCAATGCACGGCTTCTTGAACGCCCAAATGACCCAAGATTATGGTAATCTATTCTCTGATAGTACGAGATGTCTCATTTTTTTCTCCTACTCTAGGGAGGCTGCAATGGCGTTAAATTCTCTGTATTCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCGTTGAAG
Tissues leaf/root, whole_plant
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence CTCCATGGGAAAGAAATCAGCGGCTGTAGATCTCATCAATGCACGGCTTCTTGAACGCCCAAATGACCCAAGATTATGGTAATCTATTCTCTGATAGTACTCTTTGTCTGTTCTTTTCCTGTTGCTTATATATCGTAATTATTAAATGGTTGTGAAGTGCCACAATTATCTACTTTGAATGTACTCTTAATCTATGTGCGGATATTTCTTTGATCACTAGGAAGTTATTATTGTATCATAACATTAAAGTAAATTTGATGATAAAAATTGGTTTCAGGTGTTCATTGGGTGATGTTACGATTTCCGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGACAAATCAGTTCGTGCTAAGGTAGTTTGAGATACAAAACAGAAAAATCTTTTTTTGTCCATCTCTTTTAGTCCATGCTCTAATTATCTTCATCTTGCAGCGGGCTCTTGCTCGAAGCGCATACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGTATGTTTGAACATTTTGGTTCTTTCCTTATTAATTTTTTCTTTCTCTACAAGGGAAATGGAGTTATGAACTTGGCCCTTCAGGCTGATTTACTTGTGAGATGTCTCATTTTTTTCTCCTACTCTAGGGAGGCTGCAATGGCGTTAAATTCTCTGTATTCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCGTTGAAG