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BaseInfo

ncRNA ID	novel_gar_miR506
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr10:59429408-59429543 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	1 - AAGUCUGUAUGAACUAUAUGGCAU - 24
Stem-loop(if miRNA)	--  --AUG    AA     U     --   AU      AUUUA    A  U     -         UAAG   G   GU     AGUU  UAUGC GAUUU  GGA  UUAUAG     UAGU GA UUAGC CGAAUAUGU    CAU G   ||     ||||  ||||| |||||  |||  ||||||     |||| || ||||| |||||||||    |||   CG     UCAA  GUAUG CUGAA  UCU  AAUGUU     AUCA UU AAUCG GUUUAUGUA    GUA A UA  GUAUA    --     U     AG   AU      ---GA    G  U     A         ----   A
Stem-loop sequence	GUAUGAGUUAAUAUGCUGAUUUGGAAUUUAUAGAUUUAUAGUAGAUUUAGCCGAAUAUGUUAAGCAUGGAAAUGAUGUAUUUGAGCUAAUUUGACUAAGUUGUAAUAUCUGAAAGUCUGUAUGAACUAUAUGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017761346.1	ncRNA:24   UACGGUAUAUCAAGUAUGUCUGAA   1   |***=||||||||||||||*|||| targets:2025   AAAAUAUAUAGUUCAUACAAACUU   2048 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum protein trichome birefringence (LOC108461488), mRNA	protein trichome birefringence(LOC108461488)	coding protein	psRNATarget