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BaseInfo

ncRNA ID novel_gar_miR500
Species Gossypium arboreum
Class miRNA
Genome position Chr12:49420612-49420771 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - UUUGGACUGUCACGUAGGACUGCC - 24
Stem-loop(if miRNA) --UGA         GU         A           C   C          -UA   -  CAAUCCAAAU    UUUAUUUUAU
     UCCUAUGUG  AGUCCAAAU GGUUUUAAGUG CAA UUAGAUGUCC   UGU GG          UAAA          U
     |||||||||  ||||||||| ||||||||||| ||| ||||||||||   ||| ||          ||||
     AGGAUGCAC  UCAGGUUUA CCAAAAUUUAC GUU AAUCUACAGG   ACA CC          AUUU          A
CCGUC         UG         C           A   A          UCA   A  --------CU    UUUUCCAAAA
Stem-loop sequence UGAUCCUAUGUGGUAGUCCAAAUAGGUUUUAAGUGCCAACUUAGAUGUCCUAUGUGGCAAUCCAAAUUAAAUUUAUUUUAUUAAAAACCUUUUUUUAUCCCAACAACUGGACAUCUAAAUUGACAUUUAAAACCCAUUUGGACUGUCACGUAGGACUGCC