ncRNA ID | novel_gar_miR500 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:49420612-49420771 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGGACUGUCACGUAGGACUGCC - 24 |
Stem-loop(if miRNA) |
--UGA         GU         A           C   C          -UA   -  CAAUCCAAAU    UUUAUUUUAU      UCCUAUGUG  AGUCCAAAU GGUUUUAAGUG CAA UUAGAUGUCC   UGU GG          UAAA          U      |||||||||  ||||||||| ||||||||||| ||| ||||||||||   ||| ||          ||||      AGGAUGCAC  UCAGGUUUA CCAAAAUUUAC GUU AAUCUACAGG   ACA CC          AUUU          A CCGUC         UG         C           A   A          UCA   A  --------CU    UUUUCCAAAA |
Stem-loop sequence | UGAUCCUAUGUGGUAGUCCAAAUAGGUUUUAAGUGCCAACUUAGAUGUCCUAUGUGGCAAUCCAAAUUAAAUUUAUUUUAUUAAAAACCUUUUUUUAUCCCAACAACUGGACAUCUAAAUUGACAUUUAAAACCCAUUUGGACUGUCACGUAGGACUGCC |