ncRNA ID | novel_gar_miR499 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:51638824-51639021 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 175 - AUCUGAUACACGUAGUAGCUGCAC - 198 |
Stem-loop(if miRNA) |
--                   -                   A    CA      A   G                             --    -     A   AUCUGAUACACGUAGUAGC UGCACUUAGUACUACACAC UGAU  AAGUUA CGG UAUGCAUAGUAGCCUGCACUUAGUACUAC  GUGU ACCGG U   ||||||||||||||||||| ||||||||||||||||||| ||||  |||||| ||| |||||||||||||||||||||||||||||  |||| |||||   UAGACUAUGUGCAUCAUCG ACGUGAAUUAUGAUGUGUG ACUA  UUCAAU GCC AUGCGUAUCAUCGGACGUGAAUCAUGAUG  UACG UGGUU A GG                   G                   C    AC      A   G                             UG    C     A |
Stem-loop sequence | AUCUGAUACACGUAGUAGCUGCACUUAGUACUACACACAUGAUCAAAGUUAACGGGUAUGCAUAGUAGCCUGCACUUAGUACUACGUGUACCGGAUAAUUGGUCGCAUGUGUAGUACUAAGUGCAGGCUACUAUGCGUAGCCGAUAACUUCAAUCACGUGUGUAGUAUUAAGUGCAGGCUACUACGUGUAUCAGAUGG |