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BaseInfo

ncRNA ID ath-miRf10990-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - ACAAACGAAGCAGCUUGUUUGU - NA
Stem-loop(if miRNA)    G     U       A  C  C          -  A         C        UAC      G
GAU GUGAA ACAAACG AG AG UUGUUUGUUG AC UCGGUCUAG UCAAACCA   AUAUUU C
||| ||||| ||||||| || || |||||||||| || ||||||||| ||||||||   ||||||
CUA CACUU UGUUUGC UC UC AACAAACAAC UG AGCCAGAUC AGUUUGGU   UGUAGA A
   G     U       C  C  A          A  -         A        -UU      A
Stem-loop sequence GAUGGUGAAUACAAACGAAGCAGCUUGUUUGUUGACAUCGGUCUAGCUCAAACCAUACAUAUUUGCAAAGAUGUUUUGGUUUGAACUAGACCGAGUACAACAAACAAACUCCUCCGUUUGUUUUCACGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001161132.1
ncRNA:22   UGUUUGUUCGACGAAGCAAACA   1
  ||||||||||||||*|||||||
targets:1033   ACAAACAAGCUGCUCCGUUUGU   1054

1.5 Arabidopsis thaliana DCD (Development and Cell Death) domain protein mRNA DCD (Development and Cell Death) domain protein(AT3G11000) coding protein psRNATarget
NM_111937.5
ncRNA:22   UGUUUGUUCGACGAAGCAAACA   1
  ||||||||||||||*|||||||
targets:753   ACAAACAAGCUGCUCCGUUUGU   774

1.5 Arabidopsis thaliana DCD (Development and Cell Death) domain protein mRNA DCD (Development and Cell Death) domain protein(AT3G11000) coding protein psRNATarget
BX822638.1
ncRNA:22   UGUUUGUUCGACGAAGCAAACA   1
  ||||||||||||||*|||||||
targets:735   ACAAACAAGCUGCUCCGUUUGU   756

1.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT020262.1
ncRNA:22   UGUUUGUUCGACGAAGCAAACA   1
  ||||||||||||||*|||||||
targets:706   ACAAACAAGCUGCUCCGUUUGU   727

1.5 Arabidopsis thaliana At3g11000 gene, complete cds NA coding protein psRNATarget
BT020449.1
ncRNA:22   UGUUUGUUCGACGAAGCAAACA   1
  ||||||||||||||*|||||||
targets:397   ACAAACAAGCUGCUCCGUUUGU   418

1.5 Arabidopsis thaliana At3g11000 mRNA, complete cds NA coding protein psRNATarget
EF055886.1
ncRNA:22   UGUUUGUUCGACGAAGCAAACA   1
  ||||||||||||||*||||||*
targets:726   ACAAACAAGCUGCUCCGUUUGC   747

2.5 Arabidopsis thaliana At3g11000 (At3g11000) mRNA, complete cds NA coding protein psRNATarget