| ncRNA ID | novel_gar_miR492 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:62048044-62048117 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029586;SRR1029587 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UUGCGAGACUUGAUUUUGGCA - 21 |
| Stem-loop(if miRNA) |
UC -- AA AAGGAGAUAGUA U GC GGAUCGGGUC GCAGA AAUG A || |||||||||| ||||| |||| CG UUUAGUUCAG CGUUU UUAC U -A GU AG -----GAAGAGG U |
| Stem-loop sequence | UCGCGGAUCGGGUCAAGCAGAAAGGAGAUAGUAAAUGUAUUCAUUGGAGAAGUUUGCGAGACUUGAUUUUGGCA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017794061.1 |
|
3.0 | PREDICTED: Gossypium arboreum transforming growth factor-beta receptor-associated protein 1 (LOC108489481), transcript variant X2, mRNA | transforming growth factor-beta receptor-associated protein 1(LOC108489481) | coding protein | psRNATarget | |||||||||
| XM_017794060.1 |
|
3.0 | PREDICTED: Gossypium arboreum transforming growth factor-beta receptor-associated protein 1 (LOC108489481), transcript variant X1, mRNA | transforming growth factor-beta receptor-associated protein 1(LOC108489481) | coding protein | psRNATarget |