| ncRNA ID | novel_gar_miR489 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr10:91420183-91420251 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588 |
| Length | 21 |
| Mature sequence(if miRNA) | 49 - CAAGGAGGUGAUGAUUUUUGA - 69 |
| Stem-loop(if miRNA) |
-- A C UUAAUUCUU A G AGAAAU AUC CUUCCUUGC GGU UGA U |||||| ||| ||||||||| ||| ||| UUUUUA UAG GGAGGAACG UUA ACU A AG G U --------- C A |
| Stem-loop sequence | AGAAAUAAUCCCUUCCUUGCUUAAUUCUUGGUAUGAGUAAUCACAUUGCAAGGAGGUGAUGAUUUUUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017763142.1 |
|
2.5 | PREDICTED: Gossypium arboreum photosynthetic NDH subunit of lumenal location 2, chloroplastic (LOC108463203), mRNA | photosynthetic NDH subunit of lumenal location 2, chloroplastic(LOC108463203) | coding protein | psRNATarget | |||||||||
| XM_017758487.1 |
|
2.5 | PREDICTED: Gossypium arboreum proline-rich receptor-like protein kinase PERK13 (LOC108459126), mRNA | proline-rich receptor-like protein kinase PERK13(LOC108459126) | coding protein | psRNATarget |