ncRNA ID | novel_gar_miR486 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:90601619-90601836 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGAGAGAAGUAGAAGAGAAUGGG - 23 |
Stem-loop(if miRNA) |
--                  C  C           A   ----A      ---CC   A         A       CCAC                ACAAGCUCACCUC   CG   CAUUCUCUUCUGCUUCUC CU UGUUUUUCUCC UUC     UUUCUU     AAC UAGUUUUUU AUAUUUU    UUGUUAAAACUAGUCU             ACU  A   |||||||||||||||||| || ||||||||||| |||     ||||||     ||| ||||||||| |||||||    ||||||||||||||||             |||   GUAAGAGAAGAUGAAGAG GA AUAAAAGGAGG AAG     AAAGAA     UUG AUCAAAAAG UAUAAAA    AACAAUUUUGAUUAGA             UGA  A GG                  A  A           G   AGAUA      AUUAA   C         A       AAUA                ---GAUAUAAAAA   AA |
Stem-loop sequence | CAUUCUCUUCUGCUUCUCCCUCUGUUUUUCUCCAUUCAUUUCUUCCAACAUAGUUUUUUAAUAUUUUCCACUUGUUAAAACUAGUCUACAAGCUCACCUCACUCGAAAAAGUAAAAAUAUAGAGAUUAGUUUUAACAAAUAAAAAAUAUAGAAAAACUACGUUAAUUAAAGAAAAUAGAGAAGGGAGGAAAAUAAAGAGAGAAGUAGAAGAGAAUGGG |