Search result

BaseInfo

ncRNA ID	ath-miRf10989-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGGUGAGACUCCAUGUUCUU - NA
Stem-loop(if miRNA)	---G     U      CC   UU      --------A     UUCUAACCAAAUGGAAA UCGA    AUUGG GAGACU  AUG  CUUAUU         GCAAC                 A ||||    ||||| ||||||  |||  ||||||         ||||| AGCU    UAAUC CUCUGA  UGC  GAAUAG         GAUCA                 C     ACAA     -      AU   -C      GACUAUUUU     CAAUUGAUCCGUUCGAA
Stem-loop sequence	UCGAGAUUGGUGAGACUCCAUGUUCUUAUUAGCAACUUCUAACCAAAUGGAAAACAAGCUUGCCUAGUUAACACUAGUUUUAUCAGGAUAAGCCGUUAAGUCUCCUAAUAACAUCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY089086.1	ncRNA:20   UUCUUGUACCUCAGAGUGGU   1   |||||||||||||||||||| targets:931   AAGAACAUGGAGUCUCACCA   950 Target Full Sequence	0.0	Arabidopsis thaliana clone 30000 mRNA, complete sequence	NA	coding protein	psRNATarget
AK229143.1	ncRNA:20   UUCUUGUACCUCAGAGUGGU   1   |||||||||||||||||||| targets:960   AAGAACAUGGAGUCUCACCA   979 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for dehydrogenase like protein, complete cds, clone: RAFL16-42-M19	NA	coding protein	psRNATarget
NM_105786.3	ncRNA:20   UUCUUGUACCUCAGAGUGGU   1   |||||||||||||||||||| targets:1026   AAGAACAUGGAGUCUCACCA   1045 Target Full Sequence	0.0	Arabidopsis thaliana 6-phosphogluconate dehydrogenase family protein mRNA	6-phosphogluconate dehydrogenase family protein(AT1G71170)	coding protein	psRNATarget
NM_105787.2	ncRNA:20   UUCUUGUACCUCAGAGUGGU   1   ||||||||*||||||||||| targets:1047   AAGAACAUCGAGUCUCACCA   1066 Target Full Sequence	1.5	Arabidopsis thaliana 6-phosphogluconate dehydrogenase family protein partial mRNA	6-phosphogluconate dehydrogenase family protein(AT1G71180)	coding protein	psRNATarget