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BaseInfo

ncRNA ID ath-miRf10988-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GGCGCCUCUCCAUUGGCAGG - NA
Stem-loop(if miRNA)               C      A          C    CUUCCAA  -   CACAUACAUAUAUG
CUAGUUUUAGGGCG CUCUCC UUGGCAGGUC UUUA       AU AUA              A
|||||||||||||| |||||| |||||||||| ||||       || |||              A
GGUCAAAGUCCCGU GAGAGG AACCGUCCAG AAAU       CU GUA              U
              U      A          U    -AUUUAG  A   GCCUUUAAAAGCUA
Stem-loop sequence CUAGUUUUAGGGCGCCUCUCCAUUGGCAGGUCCUUUACUUCCAAAUAUACACAUACAUAUAUGAAUAUCGAAAAUUUCCGAUGAUCGAUUUAUAAAUGACCUGCCAAAGGAGAGUUGCCCUGAAACUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY117355.1
ncRNA:20   GGACGGUUACCUCUCCGCGG   1
  |||*||||||||||||||*|
targets:172   CCUACCAAUGGAGAGGCGGC   191

2.5 Arabidopsis thaliana putative Lon protease homolog 2 precursor (At5g26860) mRNA, complete cds NA coding protein psRNATarget
AY091049.1
ncRNA:20   GGACGGUUACCUCUCCGCGG   1
  |||*||||||||||||||*|
targets:253   CCUACCAAUGGAGAGGCGGC   272

2.5 Arabidopsis thaliana putative Lon protease homolog 2 precursor (At5g26860) mRNA, complete cds NA coding protein psRNATarget
AY057488.1
ncRNA:20   GGACGGUUACCUCUCCGCGG   1
  |||*||||||||||||||*|
targets:276   CCUACCAAUGGAGAGGCGGC   295

2.5 Arabidopsis thaliana AT5g26860/F2P16_120 mRNA, complete cds NA coding protein psRNATarget
U88087.1
ncRNA:20   GGACGGUUACCUCUCCGCGG   1
  |||*||||||||||||||*|
targets:307   CCUACCAAUGGAGAGGCGGC   326

2.5 Arabidopsis thaliana LON protease homolog (LON_ARA) mRNA, nuclear gene encoding mitochondrial protein, complete cds NA coding protein psRNATarget
NM_122568.4
ncRNA:20   GGACGGUUACCUCUCCGCGG   1
  |||*||||||||||||||*|
targets:403   CCUACCAAUGGAGAGGCGGC   422

2.5 Arabidopsis thaliana lon protease 1 (LON1), mRNA lon protease 1(LON1) coding protein psRNATarget
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