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BaseInfo

ncRNA ID novel_gar_miR447
Species Gossypium arboreum
Class miRNA
Genome position Chr10:80990927-80991064 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 115 - AUUGCUCUAGAAGAUAUCUGCAAC - 138
Stem-loop(if miRNA) --                 CUG           G             GGGA   AU    A CAU  U   U
  AUUGCUCUAGAAGAUAU   CAACAGAAGAA GAUAUUCAAAGAU    GUC  CAUA G   UG CAA C
  |||||||||||||||||   ||||||||||| |||||||||||||    |||  |||| |   || ||| U
  UAACGAGAUCUUCUAUA   GUUGUCUUCUU CUAUAAGUUUCUA    UAG  GUAU C   AC GUU U
AA                 UAA           A             ---A   AG    - ---  U   U
Stem-loop sequence AUUGCUCUAGAAGAUAUCUGCAACAGAAGAAGGAUAUUCAAAGAUGGGAGUCAUCAUAAGCAUUGUCAAUCUUUUUGUCACUAUGGAGAUAAUCUUUGAAUAUCAUUCUUCUGUUGAAUAUAUCUUCUAGAGCAAUAA