ncRNA ID | novel_gar_miR438 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:136053845-136054034 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGAACAAGGGAGGAAAACUGAG - 24 |
Stem-loop(if miRNA) |
--UU       -     C             A A  A         A                        CU UA   UUA  U      C  UU     GUUUUCC CCCUU UUCAUUUCUUUUA C UA UUUUUCUAU UUUUUCAUUUGUUAAAAUUAGUCC  A  CUU   UU UUUGAA AA  U     ||||||| ||||| ||||||||||||| | || ||||||||| ||||||||||||||||||||||||  |  |||   || |||||| ||     CAAAAGG GGGAA AAGUAAAGAAAAU G AU AAAAAGAUA AAAAAGUAAACAAUUUUGAUCAGG  U  GAG   AG GAGCUU UU  A GAGU       A     C             C C  C         C                        -U UC   CGG  U      U  UA |
Stem-loop sequence | UUGUUUUCCCCCUUCUUCAUUUCUUUUAACAUAAUUUUUCUAUAUUUUUCAUUUGUUAAAAUUAGUCCCUAUACUUUUAUUUUUUGAACAAUUUAAUUUUUUCGAGUGAGGCGAGCUUUGGACUAGUUUUAACAAAUGAAAAACAUAGAAAAACUACGCUAAAAGAAAUGAACAAGGGAGGAAAACUGAG |