Search result

BaseInfo

ncRNA ID novel_gar_miR437
Species Gossypium arboreum
Class miRNA
Genome position Chr11:74437025-74437226 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 179 - AGGGCUCACACGGCCGAGGACACA - 202
Stem-loop(if miRNA) --      -        -AA    ----------C   CG    CCUUUACAAAUAAAAACCUAACUCCCAAAAUCCACAUGAUUAGUGACACGCCCGUGUGUCCAAG
  UGUCCU GGCUGUGU   CUCU           GGU  AUUU                                                                C
  |||||| ||||||||   ||||           |||  ||||
  ACAGGA CCGGCACA   GGGA           GGG  GUUU                                                                A
AC      G        CUC    CUUCAAAUUUA   --    UUAGCUGUUUCUGUGCUCGAUUUUCUCCGGUGUGCCCGCACGUUGUGCCAGUACACCUGGUGUG
Stem-loop sequence UGUCCUGGCUGUGUAACUCUCGGUCGAUUUCCUUUACAAAUAAAAACCUAACUCCCAAAAUCCACAUGAUUAGUGACACGCCCGUGUGUCCAAGCAGUGUGGUCCACAUGACCGUGUUGCACGCCCGUGUGGCCUCUUUUAGCUCGUGUCUUUGUCGAUUUUUGGGGAUUUAAACUUCAGGGCUCACACGGCCGAGGACACA