ncRNA ID | novel_gar_miR437 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:74437025-74437226 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 179 - AGGGCUCACACGGCCGAGGACACA - 202 |
Stem-loop(if miRNA) |
--      -        -AA    ----------C   CG    CCUUUACAAAUAAAAACCUAACUCCCAAAAUCCACAUGAUUAGUGACACGCCCGUGUGUCCAAG   UGUCCU GGCUGUGU   CUCU           GGU  AUUU                                                                C   |||||| ||||||||   ||||           |||  ||||   ACAGGA CCGGCACA   GGGA           GGG  GUUU                                                                A AC      G        CUC    CUUCAAAUUUA   --    UUAGCUGUUUCUGUGCUCGAUUUUCUCCGGUGUGCCCGCACGUUGUGCCAGUACACCUGGUGUG |
Stem-loop sequence | UGUCCUGGCUGUGUAACUCUCGGUCGAUUUCCUUUACAAAUAAAAACCUAACUCCCAAAAUCCACAUGAUUAGUGACACGCCCGUGUGUCCAAGCAGUGUGGUCCACAUGACCGUGUUGCACGCCCGUGUGGCCUCUUUUAGCUCGUGUCUUUGUCGAUUUUUGGGGAUUUAAACUUCAGGGCUCACACGGCCGAGGACACA |