Search result

BaseInfo

ncRNA ID ath_circ_026453
Species Arabidopsis thaliana
Class circRNA
Genome position 5:8350547-8352822[+]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence ATCCCAAAGATATTAAAATGGGAAGACTATATCGTTCCCACCTCCAACCAATGGAAATGGCAGGTAGCAGTGTCTGCATTGTTTGAAGAGCGACCTGTGTTTAGTTTTCCCGAAAGGCTTGTTCATCGTTTCTCTGTTAATCTAATGTGTTGTGTTGCAGGCTGCAAATGATGATGACATATCAATAAGTTCTCATGGAT
Tissues leaf/root, aerial, inflorescences, whole_plant
Exon boundary No-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence ATCCCAAAGATATTAAAATGGGAAGACTATATCGTTCCCACCTCCAACCAATGGAAATGGCAGGTAGCAGTGTCTGCATTGTTTGAAGAGCGACCTGTGTGGACAAGAGATTCCATAGTCCAACGACTACTCGATAAAGGTCTTACATGCACACATCATATGTTAAACAGGTGAACAAATTTTATGCATTTCTTATGTGTATTATTACTGCAATAACCAACTTTCTGGAGTTTTCTCTGCAGGTTTCTTCTTAGGGCTGCATATTATTTCTCGGGTGGTCCATTTCTTAGGTTCTGGATTAAAAGAGGCTATGATCCACGGAAAGATCCTGAATCTCGTGTGTGAGTTCTATCTCTTTAAGTTTATTCATATTACAAATGCATGGTCTATGACACGGTAATGTAGAATTGTCATTTGTACACCTCAAAATAGAACAGAAATAGGCCGGTTTTACACCTCTGAACTTCCTCGTCTTCTGCAAAGTGTTTCGAGAATGATACATATTCTACTTGGCTCATTTGAGAGCGTATTTATCTTCCAATGCAGAAAGTGTTGGTGCTGACATTATCCGGGTTTTGGAAACTTGCTTGACATGAAATTTTCTTCTGTAGTTCATATTTTCCTGCATCCAGACTGCAGCTGTATGTCAAACCTCTTCACCTCTAACCTTTTTTATATTTTGTTTTTTTCAGATTCCAGAGAATGGAATTCAGGGTTCCACCTGAATTAAAGGGTTATTGTGATTCCAATGCAACTAACAAGTAAGATTTTCCATTTTTCCTTGTAAACTCAAGATATTTTTCTACTCAAGATTCTCAATTTGTAATATATATGGACAGATAAACATATATCATGATAACATTTTCTTTGCAAGTATTGATTTGTGGTCAATTGTATGAGAACATTATAATTTTTAAAACAATGCGAAGTGTGTCTGAATTCTCTAGAAACGTGTCATTTTCCGATTTTCAGTCACTTTCCGAGGATAGCAACCTAAATGTTCTCTTTTAACAGTTTCAAGATAGTTTCTCAGGGAACATATATATGAATTTACATGGAGAAATTGCAAATAAAACATTGGATATATGTTTGAAGAAACGGTCCAATTATAAAGGTGATGTTTTCTTTCTTTCTTATTTGTGACAGGTCAAAGCCAAGCTGGGATGACATTTGTGCGTTTAAAGTATTTCCTTTCAAATGCCAAACATTTCTACAGTTATTTGAACTTGACGATGAGTACATTCAACAAGAGATAAGAAAGCCTCCCAAGCAGACTACTTGTAATGTGAGTTATCAGCTAAAGCTTTTGTTAATGAAGTAGATTCCAAAAAAATTAGAGTCTTGCTTATTACAGATCAAACCTATACATGCACTTGCAAAAAATACCACTACCAAAACACTGCGTCATCAATCACACACAAATGATATATTGAGTGGAAAATTGTTTTATGTGAGGTCTTGGTTATCTGTACTGATTTGTTTTTGTTGCTAGTATAAAACAGGATGGTTCTCTGAAGCGCTGCTTGACAATTTGAGACTCCGTGTAGCTGTGAGGTTTGTATCTGTGTTTCCTGAGCCAGGTTTCGAAGACGTTTTTAAATCTATTCAAGAAGAGTTTGAGAGGTCTGAAAAGACACGTATTCAGAAAGATGCACTGCAACCAAGTCAACGGAATCACCAGGAAACAACTAAAGGTAAGATAGACAAAGCAATTTCAGTTCTTTTCATCTTTACATGTTAGGCAGCCTAGTTAGTGATTGTTGACATGCATGGAGCCAAGTGCTTCTTTTTCAAATCTCAATGGTCTCAAAATTGTGTTAAAGCATGGTGAACTTGACTGGAGTTAATTTGTTGGACATATTGTACGACGAATTTGTAAGTAAATATATAAGGGTGCACAATCACATGTGCCAGCCAAAATCGAATGAGGCAGGCATTTTATATTGTCATACATCTCATGCTCTGCTTATTATCATTTGTCATCAAACACATTCTCCTTAAAAGAAGTATGGATTAACAGTTGTTGGTGTAAAATTATCCGCAGATATGAAAAAGTGTAAAAACACAAACAAGGAGAAAGATGATGATGTTAATGCGGATGAGGATTCTGAAGACTTGGATGATGAATACGAGGAGGTAACCATGCTTACAAACTACTTCTTGTTTACTTCACCCATTAGTTTTCCCGAAAGGCTTGTTCATCGTTTCTCTGTTAATCTAATGTGTTGTGTTGCAGGCTGCAAATGATGATGACATATCAATAAGTTCTCATGGAT