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BaseInfo

ncRNA ID	ath-miRf10984-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UUCUUUGCUUCCCCAAUGCU - NA
Stem-loop(if miRNA)	U           CC  AUG      ---      CUACACAUCUUACAAGAAAGCACUUGGACAAUUAGU AUAU UUCUUUGCUUC  CA   CUGUCU   UAAGAU                                    U |||| |||||||||||  ||   ||||||   |||||| UAUA AAGAAAUGAGG  GU   GAUAGA   CUUUCG                                    A     U           AA  AGA      UCA      UUAAAUGACUCAACCACAUUCAAAGGUAAAAAAACC
Stem-loop sequence	AUAUUUUCUUUGCUUCCCCAAUGCUGUCUUAAGAUCUACACAUCUUACAAGAAAGCACUUGGACAAUUAGUUACCAAAAAAAUGGAAACUUACACCAACUCAGUAAAUUGCUUUCACUAGAUAGAGAUGAAGGAGUAAAGAAUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_104554.4	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |||||||||||||||||||| targets:109   AGCAUUGGGGAAGCAAAGAA   128 Target Full Sequence	0.0	Arabidopsis thaliana Mannose-binding lectin superfamily protein mRNA	Mannose-binding lectin superfamily protein(AT1G57570)	coding protein	psRNATarget
AK229108.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |||||||||||||||||||| targets:86   AGCAUUGGGGAAGCAAAGAA   105 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-39-D01	NA	coding protein	psRNATarget
NM_100168.3	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |||||||||||||||||||| targets:435   AGCAUUGGGGAAGCAAAGAA   454 Target Full Sequence	0.0	Arabidopsis thaliana nucleolar-like protein mRNA	nucleolar-like protein(AT1G02870)	coding protein	psRNATarget
AY093033.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |||||||||||||||||||| targets:431   AGCAUUGGGGAAGCAAAGAA   450 Target Full Sequence	0.0	Arabidopsis thaliana unknown protein (At1g02870) mRNA, complete cds	NA	coding protein	psRNATarget
AY088317.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |||||||||||||||||||| targets:398   AGCAUUGGGGAAGCAAAGAA   417 Target Full Sequence	0.0	Arabidopsis thaliana clone 5556 mRNA, complete sequence	NA	coding protein	psRNATarget
BT006570.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |||||||||||||||||||| targets:357   AGCAUUGGGGAAGCAAAGAA   376 Target Full Sequence	0.0	Arabidopsis thaliana At1g02870 gene, complete cds	NA	coding protein	psRNATarget
NM_104815.3	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   =||||||||||||*|||||| targets:146   GGCAUUGGGGAAGAAAAGAA   165 Target Full Sequence	1.5	Arabidopsis thaliana F-box family protein (FBS1), mRNA	F-box family protein(FBS1)	coding protein	psRNATarget
AK118391.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   =||||||||||||*|||||| targets:145   GGCAUUGGGGAAGAAAAGAA   164 Target Full Sequence	1.5	Arabidopsis thaliana At1g61340 mRNA for unknown protein, complete cds, clone: RAFL19-65-D17	NA	coding protein	psRNATarget
NM_001333950.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   =||||||||||||*|||||| targets:120   GGCAUUGGGGAAGAAAAGAA   139 Target Full Sequence	1.5	Arabidopsis thaliana F-box family protein (FBS1), mRNA	F-box family protein(FBS1)	coding protein	psRNATarget
BT003706.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   =||||||||||||*|||||| targets:3   GGCAUUGGGGAAGAAAAGAA   22 Target Full Sequence	1.5	Arabidopsis thaliana At1g61340 mRNA, complete cds	NA	coding protein	psRNATarget
BX817242.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   =|||||*||||||*|||||| targets:124   GGCAUUUGGGAAGAAAAGAA   143 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_126948.2	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |*=||*|||||||||||||| targets:1349   AAUAUGGGGGAAGCAAAGAA   1368 Target Full Sequence	3.0	Arabidopsis thaliana PRLI-interacting factor mRNA	PRLI-interacting factor(AT2G13690)	coding protein	psRNATarget
AK117606.2	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |*=||*|||||||||||||| targets:1268   AAUAUGGGGGAAGCAAAGAA   1287 Target Full Sequence	3.0	Arabidopsis thaliana At2g13710 mRNA for putative f13j11 PRLI-interacting factor G, complete cds, clone: RAFL17-26-C14	NA	coding protein	psRNATarget
BT029302.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |*=||*|||||||||||||| targets:1227   AAUAUGGGGGAAGCAAAGAA   1246 Target Full Sequence	3.0	Arabidopsis thaliana At2g13690 mRNA, complete cds	NA	coding protein	psRNATarget
AF315734.1	ncRNA:20   UCGUAACCCCUUCGUUUCUU   1   |*=||*|||||||||||||| targets:264   AAUAUGGGGGAAGCAAAGAA   283 Target Full Sequence	3.0	Arabidopsis thaliana PRLI-interacting factor G mRNA, partial cds	NA	coding protein	psRNATarget