| ncRNA ID | novel_gar_miR427 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:145370385-145370528 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029586;SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AACAAGUGUAAAUUCUGGUUGCGA - 24 |
| Stem-loop(if miRNA) |
-- C C A A ----U ---GA A GUAAUUAGAAUU ACACUUGUUUAACUU GCGUAAAGUU UUUUUCUC GAGU GAGCAU UGA U |||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| ||| A CGUUGGUCUUAA UGUGAACAAAUUGAA CGCAUUUCAA AAAAAGAG CUCA UUCGUG AUU U AG A U C C UAGAC AUGAG A |
| Stem-loop sequence | GUAAUUAGAAUUCACACUUGUUUAACUUCGCGUAAAGUUAUUUUUCUCAGAGUUGAGCAUGAUGAAUAUAUUAGAGUAGUGCUUCAGAUACUCCGAGAAAAACAACUUUACGCUAAGUUAAACAAGUGUAAAUUCUGGUUGCGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017759210.1 |
|
2.5 | PREDICTED: Gossypium arboreum thaumatin-like protein (LOC108459809), mRNA | thaumatin-like protein(LOC108459809) | coding protein | psRNATarget |