ncRNA ID | novel_gar_miR422 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:144006661-144006803 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 120 - CUGACAUGUCGUCCAUAUGGCAAU - 143 |
Stem-loop(if miRNA) |
--UU   CG          AC                         U       A U      U   AAAU     UCA  UGGAUGAUAU  CAGUAUUUAAUUAAUUUUUUAAAAU UUAAAAA U UUAAAA UAU    U     |||  ||||||||||  ||||||||||||||||||||||||| ||||||| | |||||| |||    A     GGU  ACCUGCUGUA  GUCAUAAAUUAAUUAAAAAAUUUUA AAUUUUU A AAUUUU AUA    U UAAC   AU          CA                         U       C C      U   AAAA |
Stem-loop sequence | UUUCACGUGGAUGAUAUACCAGUAUUUAAUUAAUUUUUUAAAAUUUUAAAAAAUUUUAAAAUUAUAAAUUAUAAAAAUAUUUUUAACACUUUUUAAUAUUUUAAAAAAUUAAUUAAAUACUGACAUGUCGUCCAUAUGGCAAU |