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BaseInfo

ncRNA ID novel_gar_miR419
Species Gossypium arboreum
Class miRNA
Genome position Chr11:60003061-60003156 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587
Length 24
Mature sequence(if miRNA) 1 - GAGAAAGCUCUUGAAUAUUCGGUC - 24
Stem-loop(if miRNA) --     -     U        C  UCACUUGG     A      -AAG UA
  GAGAA AGCUC UGAAUAUU GG        GGAAG AAAUUG    G  A
  ||||| ||||| |||||||| ||        ||||| ||||||    |
  UUCUU UUGAG ACUUGUAG UC        UCUUC UUUGAU    C  G
AG     C     U        U  ------UA     G      GAUA UU
Stem-loop sequence GAGAAAGCUCUUGAAUAUUCGGUCACUUGGGGAAGAAAAUUGAAGGUAAGUUCAUAGUAGUUUGCUUCUAUCUUGAUGUUCAUGAGUUCUUCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017788392.1
ncRNA:24   CUGGCUUAUAAGUUCUCGAAAGAG   1
  ||==*|=**|||||||||||||||
targets:322   GAUUCAGCUUUCAAGAGCUUUCUC   345

3.0 PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA dolichol kinase EVAN-like(LOC108484565) coding protein psRNATarget