ncRNA ID | novel_gar_miR419 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:60003061-60003156 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGAAAGCUCUUGAAUAUUCGGUC - 24 |
Stem-loop(if miRNA) |
--     -     U        C  UCACUUGG     A      -AAG UA   GAGAA AGCUC UGAAUAUU GG        GGAAG AAAUUG    G  A   ||||| ||||| |||||||| ||        ||||| ||||||    |   UUCUU UUGAG ACUUGUAG UC        UCUUC UUUGAU    C  G AG     C     U        U  ------UA     G      GAUA UU |
Stem-loop sequence | GAGAAAGCUCUUGAAUAUUCGGUCACUUGGGGAAGAAAAUUGAAGGUAAGUUCAUAGUAGUUUGCUUCUAUCUUGAUGUUCAUGAGUUCUUCUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788392.1 |
|
3.0 | PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA | dolichol kinase EVAN-like(LOC108484565) | coding protein | psRNATarget |