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BaseInfo

ncRNA ID novel_gar_miR416
Species Gossypium arboreum
Class miRNA
Genome position Chr1:126908115-126908245 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - GCUGGGUUGGGCUCGGCUUUUAAC - 24
Stem-loop(if miRNA) --                 UUUUAACAUUUUUAU UG  UCAGGCUUGGGCAAAAUUUUAGGCCAAUUUUUUU
  GCUGGGUUGGGCUCGGC               U  GG                                  G
  |||||||||||||||||               |  ||                                  U
  CGGCCCGAUCCGGGUUG               U  UU                                  C
CU                 --------------A --  UUUAAUCCGGGUAAACGAUACGAGUCCAGUCGGG
Stem-loop sequence GCUGGGUUGGGCUCGGCUUUUAACAUUUUUAUUUGGGUCAGGCUUGGGCAAAAUUUUAGGCCAAUUUUUUUGUCGGGCUGACCUGAGCAUAGCAAAUGGGCCUAAUUUUUUAGUUGGGCCUAGCCCGGCUC