Search result

BaseInfo

ncRNA ID	novel_gar_miR415
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:126903170-126903221 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587
Length	23
Mature sequence(if miRNA)	30 - AGAGAAGACAACGAGACUUUCCU - 52
Stem-loop(if miRNA)	--UU   -    A          CAG     AGG CUCG UGUCUUUUUU   C     ||| |||| ||||||||||   A     UUC GAGC ACAGAAGAGA   U UCCU   A    A          CUU
Stem-loop sequence	UUAGGCUCGAUGUCUUUUUUCAGCAUUUCAGAGAAGACAACGAGACUUUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017779831.1	ncRNA:23   UC--CUUUCAGAGCAACAGAAGAGA   1   ||--|*=||*=|||||||||||||| targets:231   AGCUGUGAGCUUCGUUGUCUUCUCU   255 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108477326 (LOC108477326), mRNA	uncharacterized LOC108477326(LOC108477326)	coding protein	psRNATarget