Search result

BaseInfo

ncRNA ID ath_circ_026240
Species Arabidopsis thaliana
Class circRNA
Genome position 5:7587027-7596420[-/-]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence CTGCTTTTCTGGATACTTTGGCGCAGATATAAGAGAAACCGCCTCCATATGGCCAAAATCCACATCGTAGCCTAGCATATGTATATAAAGCATTTTCCAGTCTCATTCCGACCAATAATATCGTTCCGCACTGTATTTATAGCCAACTTCAAAAAGTCATGGTTCTCATTGAGCAAGCAAGATGTAACAATGTAGCCAAC
Tissues root, aerial, inflorescences, seed
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTGCTTTTCTGGATACTTTGGCGCAGATATAAGAGAAACCGCCTCCATATGGCCAAAATCCACATCGTAGCCTAGCATATGTATATAAAGCATTTTCCAGACATATTTCTTCTTTTTATATGGTGTCAAAACCTGCAAAAATAAAACAGAATGTCAAGTAATCAAAGAGTTCTTGATTAATTCATTTCTAACATGAACCCCGAAAAAGAATAAGTTTAATGTTGGTCCAACTGGAAACACATGGATCCACTACAGGCCTGCTACAGCTCTGCTACGTGTAAGATGGAACAAGAATTTCACTCCAGAAGTTCTTACAGCAACAAAGCTTAATCTACTTCGTAATGAGCTATTCAAAATTTTCCGTGACCATGATTTAATTTCTTAGACCATCACTACATAACCGAATTTACTGCCAGACCATTCTTTTCTTCTAGTTCCTAAATGTCATCATATATTCAGTAATGAAATTCCAAGTTGAAAGCAATAGTAGTGATGTTTCAAAAGGTAGAATAATTGCTAATCTACAAGGATTTGAGCTAGCTATACAACGGCAACATTATACTGCCTATCTATTTTCACAATTGGTGTTAAATCAAAATTTATTGCCTCAATCCGATAAAGTAAGAAACTACAAGCTCCAAAACTATCCACTCGGCATGTGACCAGTGACTGTATCTTTGTTTCATCTACATTCTTATCTAACTCCCTAATCAACCTAATAGCTCTAACATTCGATTGCATTGGCATTGCAACTGCGAAGGATAAATCTCCAATATCTCTAATAAACCAAAACCTCAGCGGATACTCGACACTGAATTACCTCTCTAATGAGAATCAAAACATAGAAAATAGAATGGAGAGAATTGAGAGTAACCTTCTCATTCTTGAAGCATGTACGAATGTTTCCGAGCTCCTTATCAACTCGTAGTCTCTCCGCTTCCTTGTTCTGGCAATTACGAACGTCGCTGATAAATACGGAGAGACCTCTCATTCCGGTCATGGTTGAACCAAATCCTCAAATCCACCGTGCTCCGCCGCCTCACACGGCGCAGATCCAAACTCGCGGCACCGGATCTAACTACGAGATAAACCACAGACTAAAGCTGAAGCATAAGCAATTCGAGAGAGGTGAGATCGAAATCCCAATCTAGAAACGGAAAATGGCACCTTCAATCGAAGAAATTCAAAAGGAGAGACTGATCTTTGGAGAAGAGAGACACGCCTGCGGGAGAGAGACGAGAGACGACTTTTATTTTTCTTTATTTACAACTTTGACTATTCAATTTTGTGTAATTCAGTTTTTGTCTGTTTTGAAATTGGAATCCGAAATTGACCCGTCGAAAAACAGAATTAACGCGTCTAGACATTTGGACTAAATTTGAGGATTTATAAGTTTGCGTAATATTTTGTTAAAAAGTGTATCCTTCTGCCTTTTTGGGTAATATTTATTTACTGCTGTTTCTGGTTTCACTTTTTCATTTATTTTTAAAATGACTGTTTTCTGTCGCGGTCAATGCATTCAGTTGTAATTCAATGTACCATGAGAAAATCCTTAACAAAAAAAATGTACCATGAGAAAATCCGGTTATGAATTCGGGTCAGGTCAGGTCATGCAATGGTTTAGCTGGTCCCAACTTTTTTTTTTTTTTTTTCGTCAGACATGGTATTTGTTGGTATTAGTGGGAACGAAACAAATGGTTTATACGCAGTGCTGATTTGATTATTTTTTGTTATGAGCATTTTATAATTTTACTCAATGTATTATGAAATCTTTTGAATAAAGATTTTAGATACTCTATATTTCAGATAACAATTTTGCTAGAATCATTGCAACCAAATTACTCTGGTGAATAGGAAAGTATTGTCACTACTCTCGTTTTTGAAATACTAAATGTGTCTCATAACAAGATCATAATCTACAAGACGATGAATAGGACGAATTGTTGAGCTAGAAAAGCAGTGACGGCGATAGCGTATGCTCCTAGGATGTTGTTGTTTGGCAGTTTGAGTATCGAACTCGTAAACTTATATAACTAATGGAAGCACCAACCATTAAACTACAAGGCTTTTATATGATTGTGATGATAAAGCATCAGCTTGCTGGGCTTTAGATTTGGGTCGGCCCTGCTTATTGAACATTTTTAGTTTTATGGAAGATATTGTCCCTTTGCGTTAGCAACATCGGCTGATTTCTTAGGTATTTCGAACAGCTCCAATATCTCGGTTGAGTTTTTCTTCAAGGCATGACAAATTTTAGGGTATTCGATACTTTAAGAGAAGTTGCTTCTTCAACTTGAGCGACATTGATGTTGGTGAAGCAAACTTGCAAAAGTCAGACTTACTCAAATTTTGCTTAATCACTCTTGTTTCACAAGCCCCGGATCTAGGGTTCTTATATTTTTTTTTATTTGCAAAATTACAAATGATATAGTAATATAAAAAAATCATACTTTTGTCAATTACAAATTATGTAGTAAAAACAAAAAAAAATCATGCAAAAATTGATAAAACAGCTTTTAAATCCATAAGCAGTTTGTAAGAAAATTAAAAATAGTAAAAAAAAAATTTTCTTTCAATTATATTCTTCAAAGTAATAGTAAAAATCTGGTTGTATATATGTCGGTTGAATGTCCCACCAAGGCCAAGTCCCCACTCTATTCACACCTCAAATTAGATCAGGTTTTTACAGGTGAAATGCTATGCGTTGGATGTGTTTTTGCAATTTCCCCCCTTTATGACAACATTAAAATCTCTCAATGTGAAGGCTGGTGCGAAAAAACAGACCTCCCATCAGAAAACTCATGGAGAAACAGATTGAAAATATATAGGCACAAGAACAAGCTGATACAACCACTGACCTCACAATACAAATGTTCAGAATGAATGCAAAATTTCTTACCTAACGCAACCCGCCCGCTTTGGATAAACGGCACAAATATAATCAAAACTAGCTTTTTTCTCTCCCTTGGCTCTACATTTACTCTCCCATCATTCCATATTTTCGCCATTACATTCTACAATAACAGAAAACAAACTTTTCGACATGTGCAAGTAATCTTTTATCCCAATGAATTTAAAGTAAGCCAGCAAGCATAGCTCCTGGATCATCAGCTAAAGCCGCTGGGCTAGGCGGTTGAACTGCTGGTGATGGTGCTGGACCTGCTGCTGGAACTAGAGCTCGAGATCCCATTGGAATAGTAATTAATTGTTCCTTGATGAATTCTTTTAACCTGTAGATAAAAGGGGTCAACAATTGCAAATGAAGAAAATCTGTGATCGAGGTTGGGTTTGTGATTAAGAGGCAGATATATCATACTCAAATGTAAGGGTAGGATCTCCCGAGCCTACTGTCAATCGTAGTTGGGTTCTGTCCGCTGGGTCTGTTTCAATTCTTGCCTGAAAATCGCAAACCAAGGAAAATGTCACACGTCATTACTATAAGTCTTAAGAAATTTTAGAAATTGGAGTGGCAAGTGCCAAAACCAGGAAGTGAAACTTGGTGAAATCTCACCAAACAGAGCATGGCTCCTGTAGTTTCAGAGTAGAAGGTTGTGCTTGCCACTAGATTATTAGGGTTTGGATCCTACGACAAAAAACAATACAAGTTAAGTTTGAAGTATACATGTGTGCATGAGGAATGAAGGTTTGAGATCGTAAACAACTACTTACAAGCCCAGGGCATATCGTCACATGAAAACTGTTGAACAGATTTGCCATTTCCGGAAGAGCTAGAGGTCTTACACCTCTTACCTGAAAGAGATTGCAGTATCAGATTATATAACGCATAAAAGTAATGCTGCATTAACGAGCATGTGTAGAAGTGTTGGAAGTTCTCTATAAGTGTTGTAGCGAAAGCTAATTCACTAATTTCATTGAAAAGAAAATTCTTAGAAGCCTTTGACTACTATCCTGCGCTACTCAAATACTTTTAGTTTGATATTTGATCAGAGAAGCTGTGGAGATACATACCACTTCCTGAAGTTTCAAGGGTGGCCCTGAGATTGCTCTCCATTGAGGGAAGAACTCTTCAGATGTCAATTGTAGAGGTTGAAGAAACTTATTCAAGGTTGCCGGGATGCGTAATTTGGCACTGACCTATAAAAGATCCAGCATATCAGGTAGAGTCACAGATACTAAATATACCATTCACCAAAACAAGCTAAGTACTGTTGCAGTACGTACCACGTTTGTACCAAACTTGTAGGAGAAATCCAAAACTGCAACATCCCTACTAGGGCGGATGTTCATCACTTCAAGCGGAGATTGTACCTATAACCATGAAAAAAATTGCAACACTTAGTACATTATGCATAAATGAGTAGAAAATGACGGATTGAGTAGTCAAACTTAAATAAATCAACAAACAAAAGTACCTGTGCTCGAGGAGGAATTGTATCAGGTACTGGAGACAGATCCAGTCTTAAGTGGGCAGGGGGTAGTATCAGAGCTTGAACTGATGTAAGTGGAGAAGTATTCTTGTTTCCCATGAAGAGAACAAGTCTCCCATGGTGTCCTCTCCATTCAGCTTTGATGCCAATCTGAGGAATACAAACAATCAACAAAATGGGAACATAAGAAAGCTCGGAGGCTTGTCTGCTGCATACTTGAATAAATAAAAGCAGAAACTAGAAAAAAACAAACCTGGATATGAGGATCCTCGTATAAGACACCACTGTCTTTCAAACATAAAGCATGAAATCTCTCAGCAATATTTCCGATAAGCTGTATAAGAAAACAAAACAGTATAAGAAAAAAATACAAGCATGCAAATATATTATGGAGTACAAAAATGGCTCGGTTTCTTTTATTATGGATCTTGAATTGTGAAACAGAACATCTCAGGTAGCATTCCACCTAAGTAAACGTTACATACCATTTCCAAGTAATAAATACAAAAAGACGAAACAGAAAAAAATATGGCTATAGTTAAAAAAAAAACTAGGGAAATAATGAGCTAGCAAAAGTAGAAGTATAATGCTAACACCTACTATGCCAAAGAAAGCAAAGGAATAAGAAAAGATTACCTCCACTGTATTTGTTTGCTCTTCAACAGGTACAATGGCGGAACCATCAATTTCATCTGGAACTCCTTCTGCCCCTACGGGACCATGTTGTTCATATGAGACAGCTCCAGGTGGAGCCTCTATTGCAAGAGGACCGAGTAGGTCACTAAGGAGATCAGGTGATGGAGTTTGTGGATCTATATTACTTAAAGTTCCATTGGGATGTGAGAGAGATCGAGCCACTGACTCAGGGTCCTGCTAGACATGCAATGAAAAACAGACTGTCAGAGATAATAAGATAGAAGTATGTAGTATATAAAGGCAAGCACATCAAAAATGTTTTGTCAATTGGGGCCTAGAAAGAGAAGTACTCACCGTGCTTCCACTTAAAATTGGAACCTTCAAAGGTGGTGGTGCCCCATTAACAGGCTGTGGGTCAGCCAAAACAATAGCATTTGAAGGCTGTTGTTGTGCTCTAAGTTTGATGGCACTCTGGTCTGCGGTATCTTCAACGTTTTCTGCCTTTTTAATCAATGAAGACTATGGAAGAGACACGGAAAAAAAATCCAGCATCAAAGTCGTTTAGCACAAACTTCCCGTCAAAGTAACTTTCATAGAATCATAAAATAATTTCACAAACCTGGCGCTCCGGAAATTTTGGCATCTCAGCCAATACATCCATAAAGGCAGGCCCTTTTTTACTCAATTCAAAATATTCAACTGCCCTCTGTTGTATCTCCACATCGATACAACTCTCATATCTGCGAAAACAAAACTCATTTAGGAAACTTCATTTGGTTACCAAAAAAGACAGTACATATGATGACAAGCAAAACATTGAGGAAGGACAACAAAGTTAGCAAGTCTCACTTCTTAAATACAGCCCAAACTTTTTTTTGCAGTTCTGGATCCGGGGGTTGAGCGTGCATAAGAAGCTTTGCATATGTAGAAAGAAGAATAGGAATGGTGGGAGTCCTGAGAAAAAAAACGAAAAAAAGCAATTAAGACATACCCAAAGACAAGAAGAGCGCAATTCAACATTTGTGTTGTCCTTACGATACTGTAGGAAGCTTCTCATGTAAGATGCTAAAGAGTTCACTTGCACTGCATCCAGGTTGTCTAGCTAAAAGGTGACCATACTCCCCCAAAATATAAGCACTGACCTGAAATTCCGAAAGAAATTATATTTATTGTTGATACTAAGCACTGTTAATATTGTACTTTGCCAACAATATGGATAAATCAGAATGTGTAGCAAGGTAGTAACTCCACTTCCACAATTTAATTATATTATAATTAAAAGAAAATTTGTTATGGGAAGCGAGACTGTACAACCTTCACCATGGTCTCATGGATTGCAATTTTGTCCATATATTCTCTTGCTTTTGATGCCGCATAAGGCTGTCGGATCAAAGAAATTTGTAAGCAACTTTTGAATGTCATAAATAGGATAAACAATATATTTATCCTAACAATTTTAAGAACCTGCAGGTCTTCATTATTTGTTACAAACTGAACCACACGAAACCAAATGTCATCGCTAACAAAATCCCCAGCCTTGTCGATCAACTGAAGGATCACATCTACATACCTGAGAACATCAAAATTAACATCTTTGACCAATTGCTTGTGTAAGGATCTAAAGGGCACAGCACATGTCTCTATAGTGTGCATGAAAAAATGTACATATACTTCTTGTCGAGTTCTCTTTACCATGAAAGATCAGGAGCAAACTTCTCAGCAAGAATAGCAGCTTTAAGTGATAATTCCTCCCGCATAGAAAATTCTGCTGTGCTAAGATACTGCAATGTATTTTTGGGTTCCATGTAAGCTTAAACACTACCAACTTAATCCTTCCTTTCTGTTAAACTTCACAAATCATGAGGGAAGGTCAAAGACTTACCTGCAACAACTCTTCAACTATATCCTTTGCATTTGACACATCGCACATCCCATATAGCAAATCAAGAGCGCGTCTACGAATACTGCACGAAAGTTCAACCAATAGTGAAACTGATACCATTAGCAAAAGAACCAAGAGAATATAACTATAAATCAAACTATATGATTGTGTGAAACAGAAGCCACCATTGGCAACGGAAAAAGGATTGACACCTAATGGACTAGTACACATCCAATCTATTCATCTTTTTCTGACAAACGTCATAGAAATAGTACTGACCCACCAGCAATAATATAATAGTTCTTATGTGACCCGTGTCCGTTTACAAATTGCAACCACAGATAAGTATACCTATAATTGTTTATCACAAGAAACAAATCAACAAATTATGTTTCACTAACAAACATGTATATATACAGATTCCATTTTCTTAGAGTTTCATATATACAACCCATATCAAATAATTTCAATGCTGACTGAAAGGATCTTCAATTCACAACTACTCTAGAGACAAAGTATTGAATTATAAGAGCTAAGACAAATTTCAAGATTAAAAAAATTGTCATACTGGTTCCAAATTAGAGCAGTAAAGAGATACTGATCAGGGTTCACAAGCCAGAAAGCTGATGCTGAGATAGCAAATCTAAACCAACCTGATGTCAGGGTCTTTCAACGAGGTGATTATCTGAGACTGATGCTTCTTTATGATATCTTGAACATCTGTGACCATCAGCATTCGCGTCATATTTTCCTGCAATGTTGTCAACAAGCATCATGAGAAGCCACATAATGCACTACCAAATACTTAACAAATTACTGTTCTAGCTAAGCTTAGATGCAGGAAGTGGGTATGCAAGATCTCACCAAGCCTAGATATCTGATGTTGGGCTCACGGACAGAAATAAACTTGCCAAGAAGAGCAACACACTGTGACATCATTTCCTTCTCAGCATCAAGATGCATGACCTATATCAAAACACATTAACAAGTTAGGGGTTGCACACTAAGCCAGAAAGTTTACTAGAGTGTGCTCATCAATCTAATCATCGCGAAGAAAAGCTCTCTTTGAGGTTCAATATTTCTTGTGTAAATCTCTGATATATGTCTTCGAATTCTCTCTCATGGCATTTCATGGACAGATAGTTGACTTGAGTATAATCAACAATTGAACCTCAAAAAGTTAATGCTATTTCTTAGATAGAGCTTACCAGGGAGAGAGCTTCAAACAGCACGGCATGAGACGCATTGTTTTTATTCACATTTTTCACAACATCTGTGCCCATCAATATTCGCTGAAGGACCTGAAATTTCCATGAAATGCCATGAGAGAGATTTCGAAGACATATATCAGATATTTACACAAGAAAATTTGTACCTCAAAGAGAGCTTTTCTGGTACTGGGATCTTCAATGGTTGGAAAATATTGAAGAGCCCTCATTGCCTTAACCTGTACTGCCAAAGATATATAAGTATCCAACAACCACAACATACCAAAGCTGGGGCAAGCCTCTATTTTCATAAGCTAATTTCACATAAAATGTTTAAAATGCATGAGATTGGGAAAAGGATGTGATTAAAAAATATTGAACGTATTAACCGAGTTAAGACAAACCTGGAGCCAAGGAGATGGGATGCCATAGTATGTGTACTCCTGAGGAACATCCTGGTTCCTAGCAAGGCGTTCTAATATTTTGACACATTTAGGTAGACAACTTGAGTACGCCTCATGATTGTTAGATACCAGAGCTACAAGAAGACTCGTAGAAGACGTCAAGACACCAAGATCTCGTTCATCCAAAAGTTGTGCCATACGATCCGCCCTGGAAGTATACGACAAAGTGAATATGAAAGATGCACAAGTAAACTCAAACAACCAGTAACCCAAGAGTGTTCACACACACCAGCCATCAACGTTGACAGCATCCGGATTTTTTCGGAATAAGCGCAGTAGGCACAGTGCCGCTTTTTTCCTTACGAGAGGTCTGCAACTACTAGAAATCTGCAGCGAACAAGCCCCAAAACATTTATATGTTTACTTATATCGGGAAAAAAAACATAACATGTCATCTTTGGGAGTCACTTACAAGTAGCTTTTGAACATCAGGTGCCAATGATTCAGCAAAATCTCTTCCACCAATATTTCCAACCTACAGGACAAAATAAGCAGGGAAATGTAAGAGAGCTAGAAGAAAAAAAGCACCAGTTCAATGAAGTAAGTGGCTTTGAATCGCAAAATAATAGAGCACAAAAGATAAATGTATCCAAAGACTTCCACTAAAATAGTCATTCAACTGCATTCATAATCAGAAAGACCTCACTAAGCTCTAAAACCTCAACACAGCATGGACAAAAGCCAACATACCAAGGTCAGTGCTAAGCATTGGAAAGTCTCATTCCGACCAATAATATCGTTCCGCACTGTATTTATAGCCAACTTCAAAAAGTCATGGTTCTCATTGAGCAAGCAAGATGTAACAATGTAGCCAAC