Search result

BaseInfo

ncRNA ID ath_circ_026235
Species Arabidopsis thaliana
Class circRNA
Genome position 5:7585536-7595233[-/-]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence CTCAAACAGAGCTTTTCTGGTACTGGGATCTTCAATGGTCGGGAAATATTGAAGAGCCCTCATTGCCTTAACCTGTACTAACCAAAGATATATAAGTATCAGCTTACCAGGGAGAGAGCTTCAAACAGCACGGCATGAGACGCATTGTTTTTATTCACATTTTTCACAACATCTGTGCCCATCAATATTCGCTGAAGGAC
Tissues root, aerial, inflorescences
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTCAAACAGAGCTTTTCTGGTACTGGGATCTTCAATGGTCGGGAAATATTGAAGAGCCCTCATTGCCTTAACCTGTACTAACCAAAGATATATAAGTATCCACGATATCTTTAACTGAGTAACAAAAATACACCAAAGCTGGGCCAAGCCTCTATTTTCATAAGCTAATTTCACATAAAATGTTTAAAATGCACAGGATTTGTGAAAAGGATGCGATTAAAGAATATTTAAGCTATTAAACAAGAGTGAATAAGCCGAGTTAAGTCAAACCTGGAGCCAAGGAGATGGGATGCCATAGTATGTGTACTCCTGAGGAACATCTTGGTTCCTAGCAAGGCGTTCTAATATTTTGACACATTTAGGTAGACAACTTGAGTACGCCTCATGATTATTAGATACCAGAGCTACAAGAAGACTCGTAGAAGACGTCAAGACACCAAGATCTCGTTCATCCAAAAGTTGTGCCATACGATCCGCCCTGGAAGTATACGACAAAGAGAATATGAAAGATGCACTAGTAAAATCAAAGAACCAGTAACCCCACAGTGTTATACACACCAGCCATCCACGTTGACAGCATCAGGATTTTTTCGGAATAAGCGCAGTAGGCACAGTGCTGCTTTTTTCCTTACAAGAGGTCTGCAACTACTAGAAATCTGCAGCAAAGAGACCCCATAACATAATATGTTTAGTAATATTGGAAAAAAATATAACCTCTCATCTTTAGGAGTCACTTACAAGTAGCTTTTGAACATCAGGTGCCAATGATTCAGCAAAATCCCTTCCACCGATATTTCCAACCTACAGGAGAACGTAAGCATGGCAAGGTAAGAAAGCTAGAAAGAAAGGACCAGTTTCATGAAGTAAGTGGCTCTGAATCGTGAAATGATAGAGCACAAAAGACATAATGTACCAAAGACTTCCATTAAAACAGTCATTTAACAACATCTTATAATCAGAAGAACCTAACTATGCTCTAAAATCTCAATACAGGGTGGACAAAAGACCACATACCAAGGTCAGTGCTAGGCACTGGAAAGTCTCATTCCGACCAATAATATCGTTCCGCACTGTATTTATTGCCAACTTCAAAAAGTCATGGTTCTCATTGAGCAAGCAAGATGTAACAATGTAGCCAACCTGTAATCATGGATGAAAAGTTCAATACCTGCAAATTAGTTAAGGAGCATGAAACAATATAAATTGGAAATACAAACCCTTGAGATACAATGCATGGTTCTGGTTAAGAGTTTCTAAGATGTTACTAAGTAACTCGTGCTTATAAGTAATTGTCTGCAATACTTTCCCAGGTCAAGTCAAGTTGCAAACGCATGAAATGGTATCTAGATCTAACTGTGTGATCTTCAATGAAACTTTCTTTGTTTCAGCTTGATCAATAGAATATATTTCAGCAAACACCTCCATCTATTATCTTCTCCTAGCCTTACAAAGAAAAATTTCTTTGTTTGAGCAAACAAAACGTTGGTTTACCTGCTTTTCTGGATACTTTGGCGCAGATATAAGAGAAACCGCCTCCATATGGCCAAAATCCACATCGTAGCCTAGCATATGTATATAAAGCATTTTCCAGACATATTTCTTCTTTTTATATGGTGTCAAAACCTGCAAAAATAAAACAGAATGTCAAGTAATCAAAGAGTTCTTGATTAATTCATTTCTAACATGAACCCCGAAAAAGAATAAGTTTAATGTTGGTCCAACTGGAAACACATGGATCCACTACAGGCCTGCTACAGCTCTGCTACGTGTAAGATGGAACAAGAATTTCACTCCAGAAGTTCTTACAGCAACAAAGCTTAATCTACTTCGTAATGAGCTATTCAAAATTTTCCGTGACCATGATTTAATTTCTTAGACCATCACTACATAACCGAATTTACTGCCAGACCATTCTTTTCTTCTAGTTCCTAAATGTCATCATATATTCAGTAATGAAATTCCAAGTTGAAAGCAATAGTAGTGATGTTTCAAAAGGTAGAATAATTGCTAATCTACAAGGATTTGAGCTAGCTATACAACGGCAACATTATACTGCCTATCTATTTTCACAATTGGTGTTAAATCAAAATTTATTGCCTCAATCCGATAAAGTAAGAAACTACAAGCTCCAAAACTATCCACTCGGCATGTGACCAGTGACTGTATCTTTGTTTCATCTACATTCTTATCTAACTCCCTAATCAACCTAATAGCTCTAACATTCGATTGCATTGGCATTGCAACTGCGAAGGATAAATCTCCAATATCTCTAATAAACCAAAACCTCAGCGGATACTCGACACTGAATTACCTCTCTAATGAGAATCAAAACATAGAAAATAGAATGGAGAGAATTGAGAGTAACCTTCTCATTCTTGAAGCATGTACGAATGTTTCCGAGCTCCTTATCAACTCGTAGTCTCTCCGCTTCCTTGTTCTGGCAATTACGAACGTCGCTGATAAATACGGAGAGACCTCTCATTCCGGTCATGGTTGAACCAAATCCTCAAATCCACCGTGCTCCGCCGCCTCACACGGCGCAGATCCAAACTCGCGGCACCGGATCTAACTACGAGATAAACCACAGACTAAAGCTGAAGCATAAGCAATTCGAGAGAGGTGAGATCGAAATCCCAATCTAGAAACGGAAAATGGCACCTTCAATCGAAGAAATTCAAAAGGAGAGACTGATCTTTGGAGAAGAGAGACACGCCTGCGGGAGAGAGACGAGAGACGACTTTTATTTTTCTTTATTTACAACTTTGACTATTCAATTTTGTGTAATTCAGTTTTTGTCTGTTTTGAAATTGGAATCCGAAATTGACCCGTCGAAAAACAGAATTAACGCGTCTAGACATTTGGACTAAATTTGAGGATTTATAAGTTTGCGTAATATTTTGTTAAAAAGTGTATCCTTCTGCCTTTTTGGGTAATATTTATTTACTGCTGTTTCTGGTTTCACTTTTTCATTTATTTTTAAAATGACTGTTTTCTGTCGCGGTCAATGCATTCAGTTGTAATTCAATGTACCATGAGAAAATCCTTAACAAAAAAAATGTACCATGAGAAAATCCGGTTATGAATTCGGGTCAGGTCAGGTCATGCAATGGTTTAGCTGGTCCCAACTTTTTTTTTTTTTTTTTCGTCAGACATGGTATTTGTTGGTATTAGTGGGAACGAAACAAATGGTTTATACGCAGTGCTGATTTGATTATTTTTTGTTATGAGCATTTTATAATTTTACTCAATGTATTATGAAATCTTTTGAATAAAGATTTTAGATACTCTATATTTCAGATAACAATTTTGCTAGAATCATTGCAACCAAATTACTCTGGTGAATAGGAAAGTATTGTCACTACTCTCGTTTTTGAAATACTAAATGTGTCTCATAACAAGATCATAATCTACAAGACGATGAATAGGACGAATTGTTGAGCTAGAAAAGCAGTGACGGCGATAGCGTATGCTCCTAGGATGTTGTTGTTTGGCAGTTTGAGTATCGAACTCGTAAACTTATATAACTAATGGAAGCACCAACCATTAAACTACAAGGCTTTTATATGATTGTGATGATAAAGCATCAGCTTGCTGGGCTTTAGATTTGGGTCGGCCCTGCTTATTGAACATTTTTAGTTTTATGGAAGATATTGTCCCTTTGCGTTAGCAACATCGGCTGATTTCTTAGGTATTTCGAACAGCTCCAATATCTCGGTTGAGTTTTTCTTCAAGGCATGACAAATTTTAGGGTATTCGATACTTTAAGAGAAGTTGCTTCTTCAACTTGAGCGACATTGATGTTGGTGAAGCAAACTTGCAAAAGTCAGACTTACTCAAATTTTGCTTAATCACTCTTGTTTCACAAGCCCCGGATCTAGGGTTCTTATATTTTTTTTTATTTGCAAAATTACAAATGATATAGTAATATAAAAAAATCATACTTTTGTCAATTACAAATTATGTAGTAAAAACAAAAAAAAATCATGCAAAAATTGATAAAACAGCTTTTAAATCCATAAGCAGTTTGTAAGAAAATTAAAAATAGTAAAAAAAAAATTTTCTTTCAATTATATTCTTCAAAGTAATAGTAAAAATCTGGTTGTATATATGTCGGTTGAATGTCCCACCAAGGCCAAGTCCCCACTCTATTCACACCTCAAATTAGATCAGGTTTTTACAGGTGAAATGCTATGCGTTGGATGTGTTTTTGCAATTTCCCCCCTTTATGACAACATTAAAATCTCTCAATGTGAAGGCTGGTGCGAAAAAACAGACCTCCCATCAGAAAACTCATGGAGAAACAGATTGAAAATATATAGGCACAAGAACAAGCTGATACAACCACTGACCTCACAATACAAATGTTCAGAATGAATGCAAAATTTCTTACCTAACGCAACCCGCCCGCTTTGGATAAACGGCACAAATATAATCAAAACTAGCTTTTTTCTCTCCCTTGGCTCTACATTTACTCTCCCATCATTCCATATTTTCGCCATTACATTCTACAATAACAGAAAACAAACTTTTCGACATGTGCAAGTAATCTTTTATCCCAATGAATTTAAAGTAAGCCAGCAAGCATAGCTCCTGGATCATCAGCTAAAGCCGCTGGGCTAGGCGGTTGAACTGCTGGTGATGGTGCTGGACCTGCTGCTGGAACTAGAGCTCGAGATCCCATTGGAATAGTAATTAATTGTTCCTTGATGAATTCTTTTAACCTGTAGATAAAAGGGGTCAACAATTGCAAATGAAGAAAATCTGTGATCGAGGTTGGGTTTGTGATTAAGAGGCAGATATATCATACTCAAATGTAAGGGTAGGATCTCCCGAGCCTACTGTCAATCGTAGTTGGGTTCTGTCCGCTGGGTCTGTTTCAATTCTTGCCTGAAAATCGCAAACCAAGGAAAATGTCACACGTCATTACTATAAGTCTTAAGAAATTTTAGAAATTGGAGTGGCAAGTGCCAAAACCAGGAAGTGAAACTTGGTGAAATCTCACCAAACAGAGCATGGCTCCTGTAGTTTCAGAGTAGAAGGTTGTGCTTGCCACTAGATTATTAGGGTTTGGATCCTACGACAAAAAACAATACAAGTTAAGTTTGAAGTATACATGTGTGCATGAGGAATGAAGGTTTGAGATCGTAAACAACTACTTACAAGCCCAGGGCATATCGTCACATGAAAACTGTTGAACAGATTTGCCATTTCCGGAAGAGCTAGAGGTCTTACACCTCTTACCTGAAAGAGATTGCAGTATCAGATTATATAACGCATAAAAGTAATGCTGCATTAACGAGCATGTGTAGAAGTGTTGGAAGTTCTCTATAAGTGTTGTAGCGAAAGCTAATTCACTAATTTCATTGAAAAGAAAATTCTTAGAAGCCTTTGACTACTATCCTGCGCTACTCAAATACTTTTAGTTTGATATTTGATCAGAGAAGCTGTGGAGATACATACCACTTCCTGAAGTTTCAAGGGTGGCCCTGAGATTGCTCTCCATTGAGGGAAGAACTCTTCAGATGTCAATTGTAGAGGTTGAAGAAACTTATTCAAGGTTGCCGGGATGCGTAATTTGGCACTGACCTATAAAAGATCCAGCATATCAGGTAGAGTCACAGATACTAAATATACCATTCACCAAAACAAGCTAAGTACTGTTGCAGTACGTACCACGTTTGTACCAAACTTGTAGGAGAAATCCAAAACTGCAACATCCCTACTAGGGCGGATGTTCATCACTTCAAGCGGAGATTGTACCTATAACCATGAAAAAAATTGCAACACTTAGTACATTATGCATAAATGAGTAGAAAATGACGGATTGAGTAGTCAAACTTAAATAAATCAACAAACAAAAGTACCTGTGCTCGAGGAGGAATTGTATCAGGTACTGGAGACAGATCCAGTCTTAAGTGGGCAGGGGGTAGTATCAGAGCTTGAACTGATGTAAGTGGAGAAGTATTCTTGTTTCCCATGAAGAGAACAAGTCTCCCATGGTGTCCTCTCCATTCAGCTTTGATGCCAATCTGAGGAATACAAACAATCAACAAAATGGGAACATAAGAAAGCTCGGAGGCTTGTCTGCTGCATACTTGAATAAATAAAAGCAGAAACTAGAAAAAAACAAACCTGGATATGAGGATCCTCGTATAAGACACCACTGTCTTTCAAACATAAAGCATGAAATCTCTCAGCAATATTTCCGATAAGCTGTATAAGAAAACAAAACAGTATAAGAAAAAAATACAAGCATGCAAATATATTATGGAGTACAAAAATGGCTCGGTTTCTTTTATTATGGATCTTGAATTGTGAAACAGAACATCTCAGGTAGCATTCCACCTAAGTAAACGTTACATACCATTTCCAAGTAATAAATACAAAAAGACGAAACAGAAAAAAATATGGCTATAGTTAAAAAAAAAACTAGGGAAATAATGAGCTAGCAAAAGTAGAAGTATAATGCTAACACCTACTATGCCAAAGAAAGCAAAGGAATAAGAAAAGATTACCTCCACTGTATTTGTTTGCTCTTCAACAGGTACAATGGCGGAACCATCAATTTCATCTGGAACTCCTTCTGCCCCTACGGGACCATGTTGTTCATATGAGACAGCTCCAGGTGGAGCCTCTATTGCAAGAGGACCGAGTAGGTCACTAAGGAGATCAGGTGATGGAGTTTGTGGATCTATATTACTTAAAGTTCCATTGGGATGTGAGAGAGATCGAGCCACTGACTCAGGGTCCTGCTAGACATGCAATGAAAAACAGACTGTCAGAGATAATAAGATAGAAGTATGTAGTATATAAAGGCAAGCACATCAAAAATGTTTTGTCAATTGGGGCCTAGAAAGAGAAGTACTCACCGTGCTTCCACTTAAAATTGGAACCTTCAAAGGTGGTGGTGCCCCATTAACAGGCTGTGGGTCAGCCAAAACAATAGCATTTGAAGGCTGTTGTTGTGCTCTAAGTTTGATGGCACTCTGGTCTGCGGTATCTTCAACGTTTTCTGCCTTTTTAATCAATGAAGACTATGGAAGAGACACGGAAAAAAAATCCAGCATCAAAGTCGTTTAGCACAAACTTCCCGTCAAAGTAACTTTCATAGAATCATAAAATAATTTCACAAACCTGGCGCTCCGGAAATTTTGGCATCTCAGCCAATACATCCATAAAGGCAGGCCCTTTTTTACTCAATTCAAAATATTCAACTGCCCTCTGTTGTATCTCCACATCGATACAACTCTCATATCTGCGAAAACAAAACTCATTTAGGAAACTTCATTTGGTTACCAAAAAAGACAGTACATATGATGACAAGCAAAACATTGAGGAAGGACAACAAAGTTAGCAAGTCTCACTTCTTAAATACAGCCCAAACTTTTTTTTGCAGTTCTGGATCCGGGGGTTGAGCGTGCATAAGAAGCTTTGCATATGTAGAAAGAAGAATAGGAATGGTGGGAGTCCTGAGAAAAAAAACGAAAAAAAGCAATTAAGACATACCCAAAGACAAGAAGAGCGCAATTCAACATTTGTGTTGTCCTTACGATACTGTAGGAAGCTTCTCATGTAAGATGCTAAAGAGTTCACTTGCACTGCATCCAGGTTGTCTAGCTAAAAGGTGACCATACTCCCCCAAAATATAAGCACTGACCTGAAATTCCGAAAGAAATTATATTTATTGTTGATACTAAGCACTGTTAATATTGTACTTTGCCAACAATATGGATAAATCAGAATGTGTAGCAAGGTAGTAACTCCACTTCCACAATTTAATTATATTATAATTAAAAGAAAATTTGTTATGGGAAGCGAGACTGTACAACCTTCACCATGGTCTCATGGATTGCAATTTTGTCCATATATTCTCTTGCTTTTGATGCCGCATAAGGCTGTCGGATCAAAGAAATTTGTAAGCAACTTTTGAATGTCATAAATAGGATAAACAATATATTTATCCTAACAATTTTAAGAACCTGCAGGTCTTCATTATTTGTTACAAACTGAACCACACGAAACCAAATGTCATCGCTAACAAAATCCCCAGCCTTGTCGATCAACTGAAGGATCACATCTACATACCTGAGAACATCAAAATTAACATCTTTGACCAATTGCTTGTGTAAGGATCTAAAGGGCACAGCACATGTCTCTATAGTGTGCATGAAAAAATGTACATATACTTCTTGTCGAGTTCTCTTTACCATGAAAGATCAGGAGCAAACTTCTCAGCAAGAATAGCAGCTTTAAGTGATAATTCCTCCCGCATAGAAAATTCTGCTGTGCTAAGATACTGCAATGTATTTTTGGGTTCCATGTAAGCTTAAACACTACCAACTTAATCCTTCCTTTCTGTTAAACTTCACAAATCATGAGGGAAGGTCAAAGACTTACCTGCAACAACTCTTCAACTATATCCTTTGCATTTGACACATCGCACATCCCATATAGCAAATCAAGAGCGCGTCTACGAATACTGCACGAAAGTTCAACCAATAGTGAAACTGATACCATTAGCAAAAGAACCAAGAGAATATAACTATAAATCAAACTATATGATTGTGTGAAACAGAAGCCACCATTGGCAACGGAAAAAGGATTGACACCTAATGGACTAGTACACATCCAATCTATTCATCTTTTTCTGACAAACGTCATAGAAATAGTACTGACCCACCAGCAATAATATAATAGTTCTTATGTGACCCGTGTCCGTTTACAAATTGCAACCACAGATAAGTATACCTATAATTGTTTATCACAAGAAACAAATCAACAAATTATGTTTCACTAACAAACATGTATATATACAGATTCCATTTTCTTAGAGTTTCATATATACAACCCATATCAAATAATTTCAATGCTGACTGAAAGGATCTTCAATTCACAACTACTCTAGAGACAAAGTATTGAATTATAAGAGCTAAGACAAATTTCAAGATTAAAAAAATTGTCATACTGGTTCCAAATTAGAGCAGTAAAGAGATACTGATCAGGGTTCACAAGCCAGAAAGCTGATGCTGAGATAGCAAATCTAAACCAACCTGATGTCAGGGTCTTTCAACGAGGTGATTATCTGAGACTGATGCTTCTTTATGATATCTTGAACATCTGTGACCATCAGCATTCGCGTCATATTTTCCTGCAATGTTGTCAACAAGCATCATGAGAAGCCACATAATGCACTACCAAATACTTAACAAATTACTGTTCTAGCTAAGCTTAGATGCAGGAAGTGGGTATGCAAGATCTCACCAAGCCTAGATATCTGATGTTGGGCTCACGGACAGAAATAAACTTGCCAAGAAGAGCAACACACTGTGACATCATTTCCTTCTCAGCATCAAGATGCATGACCTATATCAAAACACATTAACAAGTTAGGGGTTGCACACTAAGCCAGAAAGTTTACTAGAGTGTGCTCATCAATCTAATCATCGCGAAGAAAAGCTCTCTTTGAGGTTCAATATTTCTTGTGTAAATCTCTGATATATGTCTTCGAATTCTCTCTCATGGCATTTCATGGACAGATAGTTGACTTGAGTATAATCAACAATTGAACCTCAAAAAGTTAATGCTATTTCTTAGATAGAGCTTACCAGGGAGAGAGCTTCAAACAGCACGGCATGAGACGCATTGTTTTTATTCACATTTTTCACAACATCTGTGCCCATCAATATTCGCTGAAGGAC