Search result

BaseInfo

ncRNA ID ath_circ_026228
Species Arabidopsis thaliana
Class circRNA
Genome position 5:7583429-7593192[-/-]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence CTTCACCATAGTCTCATGTATTGCGATTTTGTCCAAATATTCTCTTGCTTTTGACGCGGCGTAAGGCTGTCAGGTCAAAGAAATATGTAAGCAACTTTGATAGGAAGCTTCTCATGTAAGATGCTAAAGAGTTCACTTGCACTGCATCCAGGTTGTCTAGCTAAAAGGTGACCATACTCCCCCAAAATATAAGCACTGAC
Tissues leaf/root, leaf, aerial, inflorescences, seed, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTCACCATAGTCTCATGTATTGCGATTTTGTCCAAATATTCTCTTGCTTTTGACGCGGCGTAAGGCTGTCAGGTCAAAGAAATATGTAAGCAACTTTGAATGTCATAAATAGGATAAACAATATATTTTTCCTAACAATTATATAAACCTGCAGGTCTTCATTATTTGTTACAAACTGAACCACACGAAACCATATGTCATCGCTAACAAAATCCCCAGCCTTGTCGATCAACTGAAGGATCACATCAACATACCTGAAAACATCAAAATTAACATCTTTAACCAGTTGATTTGCAAGGATCTAAAGGTCACACCAAATGGATAATGCATGTTACTGTAACCAAATTTGTGTGCATGAATGAAGTGTACATATACTTCGTATCGAGTTATCCTCACCATGATAGATCAGGAGCAAACTTCTCAGCAAGGATAGCAGCTTTAAGTGATAATTCTTCCCGCATGGAAAACTCTGCTGTGCTAAGATACTGCAATATATTTTTAGCTTCCATGTAAGCTTAAACACTACACAACTTAATCCTTCCTTTCTGTTAAACTTCACAAATCATAAGGAGACTAAAAATCAAGAAATATTAATATAAAGTAAGGTCAAAGACTTACCTGCAGCAACTCTTCGACTATATCCTTTGCATTTGACACATCACACATCCCATATAATAAATCAAGAGCACGCCTACGAATACTGCAGGAAAGTTCAACCAATAGTGAATCTGACACCATAAGCAAAAGAACCAAGAGATGATAAATCAAACTATATGTTTGTAAAACGGAAGCCACCATTTGCAATGGAAATAAGATCAAGACATAATGGACTGTGGTACTTATCCATCTTTTACTAACAAACGTCATCGAAATAGTGCTGACCCACCGGCCAATAATATAATAATATAATATTTCTTATGTGACCGTATACCACATATAATTATACCTATAGCTTATCACAAGAAAACAAATCAACAAATAATGTTTCACTAAAAAATATAGATCCCATTTTCTTAAAATTTCATATATACTACCCAAATCAAATAATTTTAATGCTGACAGAAATAATCTTATTCACAACTACTATAGAGACAAAGTAAAAAACGGTATATTAAATCATAAGAAGTAAGACCGATTTGATGATTGAAAAACTGTCGTACTGGTTCCAAATTAGAACAGTAACGAGATACTGATCCGGGTTCACAAGCCAGAAAAGCTGATGCTTAGATGGCAAATCTAAACCAACCTGATGTCAGGGTCTTTCAAGGAGGTGATTATCTGAGACTGATGCTTCTTTATGATATCTTGAACATCTGTGACCATCAGCATCCGCGTCATATTTTCCTGTAATTTTGTCAAAAAATGCATCATGAGAAACCACCAACCACTTCACAAACTACTCCAGCTAGGCTTAGATGCAGGAAGTGGTATGCAAGATCTCACCAAGCCTAGATATCTGATGTTGGGCTCACGGACAGAAATAAACTTGCCAAGAAGAGCAACACACTGTGACATCATTTCCTTCTCAGCATCAAGATGCATGACCTATATCAAAACACATTAAAAAGTTAGGAGGTTGCACACTAAGCCAGAGAACTGTTAGGAACAATTAAGTCAACTATCCATGATAAACCTCTTAGAAATAGTGGCGAAACCTTCAAGCAGAGCATCTAAATTTATTTTACTTTCACACAAGAAAAACAACAGACAAAGAATATCGTACAATTAGCTGCAAGCAATTCAAACACTTGAAGTTTCTCTAGCAAAGCCAAAAAATATATTTTAAACGTCCATGCACACATCAGTAGTCTGCTTTGAGTAAATGCGTCTTTACAGGACGTTGAGCAGGGGTGAAGGGGAAGAGAGAGAAAAATAGGTGCCCACTAGTAAAATTCATGGTATCAACATTTCCCCAGCTATCCGACGAACTTACCAGGGATAGAGCTTCAAACAGCACAGCATGAGACGCATTGTTTTTATTCACATTTTTCACAACATCTGTCCCCATCAATATTCGCTGAAGGACCTGAAATTTCCATGAAATGCCATGCCATGAGAGGAAATTCAAAGACATATATTACAGATTTACACATGAAAATATTGAACCTCAAACAGAGCTTTTCTGGTACTGGGATCTTCAATGGTCGGGAAATATTGAAGAGCCCTCATTGCCTTAACCTGTACTAACCAAAGATATATAAGTATCCACGATATCTTTAACTGAGTAACAAAAATACACCAAAGCTGGGCCAAGCCTCTATTTTCATAAGCTAATTTCACATAAAATGTTTAAAATGCACAGGATTTGTGAAAAGGATGCGATTAAAGAATATTTAAGCTATTAAACAAGAGTGAATAAGCCGAGTTAAGTCAAACCTGGAGCCAAGGAGATGGGATGCCATAGTATGTGTACTCCTGAGGAACATCTTGGTTCCTAGCAAGGCGTTCTAATATTTTGACACATTTAGGTAGACAACTTGAGTACGCCTCATGATTATTAGATACCAGAGCTACAAGAAGACTCGTAGAAGACGTCAAGACACCAAGATCTCGTTCATCCAAAAGTTGTGCCATACGATCCGCCCTGGAAGTATACGACAAAGAGAATATGAAAGATGCACTAGTAAAATCAAAGAACCAGTAACCCCACAGTGTTATACACACCAGCCATCCACGTTGACAGCATCAGGATTTTTTCGGAATAAGCGCAGTAGGCACAGTGCTGCTTTTTTCCTTACAAGAGGTCTGCAACTACTAGAAATCTGCAGCAAAGAGACCCCATAACATAATATGTTTAGTAATATTGGAAAAAAATATAACCTCTCATCTTTAGGAGTCACTTACAAGTAGCTTTTGAACATCAGGTGCCAATGATTCAGCAAAATCCCTTCCACCGATATTTCCAACCTACAGGAGAACGTAAGCATGGCAAGGTAAGAAAGCTAGAAAGAAAGGACCAGTTTCATGAAGTAAGTGGCTCTGAATCGTGAAATGATAGAGCACAAAAGACATAATGTACCAAAGACTTCCATTAAAACAGTCATTTAACAACATCTTATAATCAGAAGAACCTAACTATGCTCTAAAATCTCAATACAGGGTGGACAAAAGACCACATACCAAGGTCAGTGCTAGGCACTGGAAAGTCTCATTCCGACCAATAATATCGTTCCGCACTGTATTTATTGCCAACTTCAAAAAGTCATGGTTCTCATTGAGCAAGCAAGATGTAACAATGTAGCCAACCTGTAATCATGGATGAAAAGTTCAATACCTGCAAATTAGTTAAGGAGCATGAAACAATATAAATTGGAAATACAAACCCTTGAGATACAATGCATGGTTCTGGTTAAGAGTTTCTAAGATGTTACTAAGTAACTCGTGCTTATAAGTAATTGTCTGCAATACTTTCCCAGGTCAAGTCAAGTTGCAAACGCATGAAATGGTATCTAGATCTAACTGTGTGATCTTCAATGAAACTTTCTTTGTTTCAGCTTGATCAATAGAATATATTTCAGCAAACACCTCCATCTATTATCTTCTCCTAGCCTTACAAAGAAAAATTTCTTTGTTTGAGCAAACAAAACGTTGGTTTACCTGCTTTTCTGGATACTTTGGCGCAGATATAAGAGAAACCGCCTCCATATGGCCAAAATCCACATCGTAGCCTAGCATATGTATATAAAGCATTTTCCAGACATATTTCTTCTTTTTATATGGTGTCAAAACCTGCAAAAATAAAACAGAATGTCAAGTAATCAAAGAGTTCTTGATTAATTCATTTCTAACATGAACCCCGAAAAAGAATAAGTTTAATGTTGGTCCAACTGGAAACACATGGATCCACTACAGGCCTGCTACAGCTCTGCTACGTGTAAGATGGAACAAGAATTTCACTCCAGAAGTTCTTACAGCAACAAAGCTTAATCTACTTCGTAATGAGCTATTCAAAATTTTCCGTGACCATGATTTAATTTCTTAGACCATCACTACATAACCGAATTTACTGCCAGACCATTCTTTTCTTCTAGTTCCTAAATGTCATCATATATTCAGTAATGAAATTCCAAGTTGAAAGCAATAGTAGTGATGTTTCAAAAGGTAGAATAATTGCTAATCTACAAGGATTTGAGCTAGCTATACAACGGCAACATTATACTGCCTATCTATTTTCACAATTGGTGTTAAATCAAAATTTATTGCCTCAATCCGATAAAGTAAGAAACTACAAGCTCCAAAACTATCCACTCGGCATGTGACCAGTGACTGTATCTTTGTTTCATCTACATTCTTATCTAACTCCCTAATCAACCTAATAGCTCTAACATTCGATTGCATTGGCATTGCAACTGCGAAGGATAAATCTCCAATATCTCTAATAAACCAAAACCTCAGCGGATACTCGACACTGAATTACCTCTCTAATGAGAATCAAAACATAGAAAATAGAATGGAGAGAATTGAGAGTAACCTTCTCATTCTTGAAGCATGTACGAATGTTTCCGAGCTCCTTATCAACTCGTAGTCTCTCCGCTTCCTTGTTCTGGCAATTACGAACGTCGCTGATAAATACGGAGAGACCTCTCATTCCGGTCATGGTTGAACCAAATCCTCAAATCCACCGTGCTCCGCCGCCTCACACGGCGCAGATCCAAACTCGCGGCACCGGATCTAACTACGAGATAAACCACAGACTAAAGCTGAAGCATAAGCAATTCGAGAGAGGTGAGATCGAAATCCCAATCTAGAAACGGAAAATGGCACCTTCAATCGAAGAAATTCAAAAGGAGAGACTGATCTTTGGAGAAGAGAGACACGCCTGCGGGAGAGAGACGAGAGACGACTTTTATTTTTCTTTATTTACAACTTTGACTATTCAATTTTGTGTAATTCAGTTTTTGTCTGTTTTGAAATTGGAATCCGAAATTGACCCGTCGAAAAACAGAATTAACGCGTCTAGACATTTGGACTAAATTTGAGGATTTATAAGTTTGCGTAATATTTTGTTAAAAAGTGTATCCTTCTGCCTTTTTGGGTAATATTTATTTACTGCTGTTTCTGGTTTCACTTTTTCATTTATTTTTAAAATGACTGTTTTCTGTCGCGGTCAATGCATTCAGTTGTAATTCAATGTACCATGAGAAAATCCTTAACAAAAAAAATGTACCATGAGAAAATCCGGTTATGAATTCGGGTCAGGTCAGGTCATGCAATGGTTTAGCTGGTCCCAACTTTTTTTTTTTTTTTTTCGTCAGACATGGTATTTGTTGGTATTAGTGGGAACGAAACAAATGGTTTATACGCAGTGCTGATTTGATTATTTTTTGTTATGAGCATTTTATAATTTTACTCAATGTATTATGAAATCTTTTGAATAAAGATTTTAGATACTCTATATTTCAGATAACAATTTTGCTAGAATCATTGCAACCAAATTACTCTGGTGAATAGGAAAGTATTGTCACTACTCTCGTTTTTGAAATACTAAATGTGTCTCATAACAAGATCATAATCTACAAGACGATGAATAGGACGAATTGTTGAGCTAGAAAAGCAGTGACGGCGATAGCGTATGCTCCTAGGATGTTGTTGTTTGGCAGTTTGAGTATCGAACTCGTAAACTTATATAACTAATGGAAGCACCAACCATTAAACTACAAGGCTTTTATATGATTGTGATGATAAAGCATCAGCTTGCTGGGCTTTAGATTTGGGTCGGCCCTGCTTATTGAACATTTTTAGTTTTATGGAAGATATTGTCCCTTTGCGTTAGCAACATCGGCTGATTTCTTAGGTATTTCGAACAGCTCCAATATCTCGGTTGAGTTTTTCTTCAAGGCATGACAAATTTTAGGGTATTCGATACTTTAAGAGAAGTTGCTTCTTCAACTTGAGCGACATTGATGTTGGTGAAGCAAACTTGCAAAAGTCAGACTTACTCAAATTTTGCTTAATCACTCTTGTTTCACAAGCCCCGGATCTAGGGTTCTTATATTTTTTTTTATTTGCAAAATTACAAATGATATAGTAATATAAAAAAATCATACTTTTGTCAATTACAAATTATGTAGTAAAAACAAAAAAAAATCATGCAAAAATTGATAAAACAGCTTTTAAATCCATAAGCAGTTTGTAAGAAAATTAAAAATAGTAAAAAAAAAATTTTCTTTCAATTATATTCTTCAAAGTAATAGTAAAAATCTGGTTGTATATATGTCGGTTGAATGTCCCACCAAGGCCAAGTCCCCACTCTATTCACACCTCAAATTAGATCAGGTTTTTACAGGTGAAATGCTATGCGTTGGATGTGTTTTTGCAATTTCCCCCCTTTATGACAACATTAAAATCTCTCAATGTGAAGGCTGGTGCGAAAAAACAGACCTCCCATCAGAAAACTCATGGAGAAACAGATTGAAAATATATAGGCACAAGAACAAGCTGATACAACCACTGACCTCACAATACAAATGTTCAGAATGAATGCAAAATTTCTTACCTAACGCAACCCGCCCGCTTTGGATAAACGGCACAAATATAATCAAAACTAGCTTTTTTCTCTCCCTTGGCTCTACATTTACTCTCCCATCATTCCATATTTTCGCCATTACATTCTACAATAACAGAAAACAAACTTTTCGACATGTGCAAGTAATCTTTTATCCCAATGAATTTAAAGTAAGCCAGCAAGCATAGCTCCTGGATCATCAGCTAAAGCCGCTGGGCTAGGCGGTTGAACTGCTGGTGATGGTGCTGGACCTGCTGCTGGAACTAGAGCTCGAGATCCCATTGGAATAGTAATTAATTGTTCCTTGATGAATTCTTTTAACCTGTAGATAAAAGGGGTCAACAATTGCAAATGAAGAAAATCTGTGATCGAGGTTGGGTTTGTGATTAAGAGGCAGATATATCATACTCAAATGTAAGGGTAGGATCTCCCGAGCCTACTGTCAATCGTAGTTGGGTTCTGTCCGCTGGGTCTGTTTCAATTCTTGCCTGAAAATCGCAAACCAAGGAAAATGTCACACGTCATTACTATAAGTCTTAAGAAATTTTAGAAATTGGAGTGGCAAGTGCCAAAACCAGGAAGTGAAACTTGGTGAAATCTCACCAAACAGAGCATGGCTCCTGTAGTTTCAGAGTAGAAGGTTGTGCTTGCCACTAGATTATTAGGGTTTGGATCCTACGACAAAAAACAATACAAGTTAAGTTTGAAGTATACATGTGTGCATGAGGAATGAAGGTTTGAGATCGTAAACAACTACTTACAAGCCCAGGGCATATCGTCACATGAAAACTGTTGAACAGATTTGCCATTTCCGGAAGAGCTAGAGGTCTTACACCTCTTACCTGAAAGAGATTGCAGTATCAGATTATATAACGCATAAAAGTAATGCTGCATTAACGAGCATGTGTAGAAGTGTTGGAAGTTCTCTATAAGTGTTGTAGCGAAAGCTAATTCACTAATTTCATTGAAAAGAAAATTCTTAGAAGCCTTTGACTACTATCCTGCGCTACTCAAATACTTTTAGTTTGATATTTGATCAGAGAAGCTGTGGAGATACATACCACTTCCTGAAGTTTCAAGGGTGGCCCTGAGATTGCTCTCCATTGAGGGAAGAACTCTTCAGATGTCAATTGTAGAGGTTGAAGAAACTTATTCAAGGTTGCCGGGATGCGTAATTTGGCACTGACCTATAAAAGATCCAGCATATCAGGTAGAGTCACAGATACTAAATATACCATTCACCAAAACAAGCTAAGTACTGTTGCAGTACGTACCACGTTTGTACCAAACTTGTAGGAGAAATCCAAAACTGCAACATCCCTACTAGGGCGGATGTTCATCACTTCAAGCGGAGATTGTACCTATAACCATGAAAAAAATTGCAACACTTAGTACATTATGCATAAATGAGTAGAAAATGACGGATTGAGTAGTCAAACTTAAATAAATCAACAAACAAAAGTACCTGTGCTCGAGGAGGAATTGTATCAGGTACTGGAGACAGATCCAGTCTTAAGTGGGCAGGGGGTAGTATCAGAGCTTGAACTGATGTAAGTGGAGAAGTATTCTTGTTTCCCATGAAGAGAACAAGTCTCCCATGGTGTCCTCTCCATTCAGCTTTGATGCCAATCTGAGGAATACAAACAATCAACAAAATGGGAACATAAGAAAGCTCGGAGGCTTGTCTGCTGCATACTTGAATAAATAAAAGCAGAAACTAGAAAAAAACAAACCTGGATATGAGGATCCTCGTATAAGACACCACTGTCTTTCAAACATAAAGCATGAAATCTCTCAGCAATATTTCCGATAAGCTGTATAAGAAAACAAAACAGTATAAGAAAAAAATACAAGCATGCAAATATATTATGGAGTACAAAAATGGCTCGGTTTCTTTTATTATGGATCTTGAATTGTGAAACAGAACATCTCAGGTAGCATTCCACCTAAGTAAACGTTACATACCATTTCCAAGTAATAAATACAAAAAGACGAAACAGAAAAAAATATGGCTATAGTTAAAAAAAAAACTAGGGAAATAATGAGCTAGCAAAAGTAGAAGTATAATGCTAACACCTACTATGCCAAAGAAAGCAAAGGAATAAGAAAAGATTACCTCCACTGTATTTGTTTGCTCTTCAACAGGTACAATGGCGGAACCATCAATTTCATCTGGAACTCCTTCTGCCCCTACGGGACCATGTTGTTCATATGAGACAGCTCCAGGTGGAGCCTCTATTGCAAGAGGACCGAGTAGGTCACTAAGGAGATCAGGTGATGGAGTTTGTGGATCTATATTACTTAAAGTTCCATTGGGATGTGAGAGAGATCGAGCCACTGACTCAGGGTCCTGCTAGACATGCAATGAAAAACAGACTGTCAGAGATAATAAGATAGAAGTATGTAGTATATAAAGGCAAGCACATCAAAAATGTTTTGTCAATTGGGGCCTAGAAAGAGAAGTACTCACCGTGCTTCCACTTAAAATTGGAACCTTCAAAGGTGGTGGTGCCCCATTAACAGGCTGTGGGTCAGCCAAAACAATAGCATTTGAAGGCTGTTGTTGTGCTCTAAGTTTGATGGCACTCTGGTCTGCGGTATCTTCAACGTTTTCTGCCTTTTTAATCAATGAAGACTATGGAAGAGACACGGAAAAAAAATCCAGCATCAAAGTCGTTTAGCACAAACTTCCCGTCAAAGTAACTTTCATAGAATCATAAAATAATTTCACAAACCTGGCGCTCCGGAAATTTTGGCATCTCAGCCAATACATCCATAAAGGCAGGCCCTTTTTTACTCAATTCAAAATATTCAACTGCCCTCTGTTGTATCTCCACATCGATACAACTCTCATATCTGCGAAAACAAAACTCATTTAGGAAACTTCATTTGGTTACCAAAAAAGACAGTACATATGATGACAAGCAAAACATTGAGGAAGGACAACAAAGTTAGCAAGTCTCACTTCTTAAATACAGCCCAAACTTTTTTTTGCAGTTCTGGATCCGGGGGTTGAGCGTGCATAAGAAGCTTTGCATATGTAGAAAGAAGAATAGGAATGGTGGGAGTCCTGAGAAAAAAAACGAAAAAAAGCAATTAAGACATACCCAAAGACAAGAAGAGCGCAATTCAACATTTGTGTTGTCCTTACGATACTGTAGGAAGCTTCTCATGTAAGATGCTAAAGAGTTCACTTGCACTGCATCCAGGTTGTCTAGCTAAAAGGTGACCATACTCCCCCAAAATATAAGCACTGAC