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BaseInfo

ncRNA ID	novel_gar_miR411
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr11:36171482-36171570 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587;SRR1029586
Length	24
Mature sequence(if miRNA)	66 - AGCCACGUGGUGCUUUGAAAGGCU - 89
Stem-loop(if miRNA)	--   C   UU UG         A   AU     AGAAA     AAU   CCU UUA  G  UCACGUGGU AAC  AAAUU     AUAUA   A   ||| |||  |  ||||||||| |||  |||||     |||||   GGA AGU  C  GGUGCACCG UUG  UUUAA     UAUAU   U UC   A   UU GU         A   -C     ----A     AAA
Stem-loop sequence	CCUCUUAUUGUGUCACGUGGUAAACAUAAAUUAGAAAAUAUAAAUAUAAAUAUAUAAAUUUCGUUAGCCACGUGGUGCUUUGAAAGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017790591.1	ncRNA:24   UCGGAAAGUUUCGUGGUGCACCGA   1   =||**|||||||||*||||||||| targets:2539   GGCACUUCAAAGCAGCACGUGGCU   2562 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum probable alpha-mannosidase At5g13980 (LOC108486503), transcript variant X2, mRNA	probable alpha-mannosidase At5g13980(LOC108486503)	coding protein	psRNATarget
XM_017790590.1	ncRNA:24   UCGGAAAGUUUCGUGGUGCACCGA   1   =||**|||||||||*||||||||| targets:2539   GGCACUUCAAAGCAGCACGUGGCU   2562 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum probable alpha-mannosidase At5g13980 (LOC108486503), transcript variant X1, mRNA	probable alpha-mannosidase At5g13980(LOC108486503)	coding protein	psRNATarget
XM_017755941.1	ncRNA:24   UCGGAAAGUUUCGUGGUGCACCGA   1   ||---|||||||||*||||||||* targets:1786   AG---UUCAAAGCAGCACGUGGCC   1806 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108457097 (LOC108457097), mRNA	uncharacterized LOC108457097(LOC108457097)	coding protein	psRNATarget