ncRNA ID | novel_gar_miR409 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:123502773-123502921 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 126 - AAAGGGAUAAGAAUGACGUAAAAU - 149 |
Stem-loop(if miRNA) |
--UUC  U                UC A            U      AU     A     GAAAAAUUCAAAUCCA      AC UUAUUCUUAUCUCUUU  A UAGGAGAAUGAC AAUCAG  UUUUU CUUCU                A      || ||||||||||||||||  | |||||||||||| ||||||  ||||| |||||      UG AGUAAGAAUAGGGAAA  U AUCCUCUUACUG UUAGUC  AAAAA GGAGA                C UAAAA  C                GA C            U      --     -     AUUAAAAAUCGUAAAU |
Stem-loop sequence | UUCACUUUAUUCUUAUCUCUUUUCAAUAGGAGAAUGACUAAUCAGAUUUUUUACUUCUGAAAAAUUCAAAUCCAACUAAAUGCUAAAAAUUAAGAGGAAAAACUGAUUUGUCAUUCUCCUACUAGAAAGGGAUAAGAAUGACGUAAAAU |