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BaseInfo

ncRNA ID novel_gar_miR409
Species Gossypium arboreum
Class miRNA
Genome position Chr1:123502773-123502921 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 126 - AAAGGGAUAAGAAUGACGUAAAAU - 149
Stem-loop(if miRNA) --UUC  U                UC A            U      AU     A     GAAAAAUUCAAAUCCA
     AC UUAUUCUUAUCUCUUU  A UAGGAGAAUGAC AAUCAG  UUUUU CUUCU                A
     || ||||||||||||||||  | |||||||||||| ||||||  ||||| |||||
     UG AGUAAGAAUAGGGAAA  U AUCCUCUUACUG UUAGUC  AAAAA GGAGA                C
UAAAA  C                GA C            U      --     -     AUUAAAAAUCGUAAAU
Stem-loop sequence UUCACUUUAUUCUUAUCUCUUUUCAAUAGGAGAAUGACUAAUCAGAUUUUUUACUUCUGAAAAAUUCAAAUCCAACUAAAUGCUAAAAAUUAAGAGGAAAAACUGAUUUGUCAUUCUCCUACUAGAAAGGGAUAAGAAUGACGUAAAAU