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BaseInfo

ncRNA ID ath-miRf10981-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UAUCAGGAGGUUCAGUCAUG - NA
Stem-loop(if miRNA)    A        -G   C  U A   ACU   UU  C   CA   UU      A
CGA UAUCAGGA  GUU AG C UGC   GCA  CA UAG  UCU  AACGAC C
||| ||||||||  ||| || | |||   |||  || |||  |||  |||||| C
GCU GUAGUCCU  CAA UU G AUG   CGU  GU AUC  AGG  UUGUUG G
   -        AA   C  - A   GCU   UG  -   UA   -U      G
Stem-loop sequence CGAAUAUCAGGAGGUUCAGUCAUGCACUGCAUUCACUAGCAUCUUUAACGACACCGGGUUGUUUGGAAUCUAUGGUUGCUCGGUAAGUUCAACAAUCCUGAUGUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116209.3
ncRNA:20   GUACUGACUUGGAGGACUAU   1
  ||||=||||||||||||=||
targets:1294   CAUGGCUGAACCUCCUGGUA   1313

2.5 Arabidopsis thaliana cytokinin oxidase/dehydrogenase 6 (CKX6), mRNA cytokinin oxidase/dehydrogenase 6(CKX6) coding protein psRNATarget
AK228457.1
ncRNA:20   GUACUGACUUGGAGGACUAU   1
  ||||=||||||||||||=||
targets:1294   CAUGGCUGAACCUCCUGGUA   1313

2.5 Arabidopsis thaliana mRNA for cytokinin oxidase -like protein, complete cds, clone: RAFL15-04-H22 NA coding protein psRNATarget
AY090926.1
ncRNA:20   GUACUGACUUGGAGGACUAU   1
  ||||=||||||||||||=||
targets:1481   CAUGGCUGAACCUCCUGGUA   1500

2.5 Arabidopsis thaliana At3g63440 mRNA sequence NA coding protein psRNATarget