ncRNA ID | ath-miRf10981-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UAUCAGGAGGUUCAGUCAUG - NA |
Stem-loop(if miRNA) |
   A        -G   C  U A   ACU   UU  C   CA   UU      A CGA UAUCAGGA  GUU AG C UGC   GCA  CA UAG  UCU  AACGAC C ||| ||||||||  ||| || | |||   |||  || |||  |||  |||||| C GCU GUAGUCCU  CAA UU G AUG   CGU  GU AUC  AGG  UUGUUG G    -        AA   C  - A   GCU   UG  -   UA   -U      G |
Stem-loop sequence | CGAAUAUCAGGAGGUUCAGUCAUGCACUGCAUUCACUAGCAUCUUUAACGACACCGGGUUGUUUGGAAUCUAUGGUUGCUCGGUAAGUUCAACAAUCCUGAUGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_116209.3 |
|
2.5 | Arabidopsis thaliana cytokinin oxidase/dehydrogenase 6 (CKX6), mRNA | cytokinin oxidase/dehydrogenase 6(CKX6) | coding protein | psRNATarget | |||||||||
AK228457.1 |
|
2.5 | Arabidopsis thaliana mRNA for cytokinin oxidase -like protein, complete cds, clone: RAFL15-04-H22 | NA | coding protein | psRNATarget | |||||||||
AY090926.1 |
|
2.5 | Arabidopsis thaliana At3g63440 mRNA sequence | NA | coding protein | psRNATarget |