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BaseInfo

ncRNA ID novel_gar_miR400
Species Gossypium arboreum
Class miRNA
Genome position Chr1:112540268-112540356 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588
Length 24
Mature sequence(if miRNA) 66 - UGACACACGGGCGUGUGACUUGGC - 89
Stem-loop(if miRNA) --     A    -   -       CCU G    U  --------     A
  CAAGU CACA GCC GUGUGUC   U GUGU GA        AUUUG A
  ||||| |||| ||| |||||||   | |||| ||        |||||
  GUUCA GUGU CGG CACACAG   A CACA CU        UGAAC G
CG     -    G   G       UCC G    C  CGUAUACC     A
Stem-loop sequence CAAGUACACAGCCGUGUGUCCCUUGGUGUUGAAUUUGAAGACAAGUCCAUAUGCUCCACACGACCUGACACACGGGCGUGUGACUUGGC