| ncRNA ID | novel_gar_miR398 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:192253-192317 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GCAUCUCUGUAGCGGCAAAGAGCA - 24 |
| Stem-loop(if miRNA) |
-- A A G A - - GA GC UCUCUGU GC GCA AGA GC AGAUC A || ||||||| || ||| ||| || ||||| CG AGAGGCG CG UGU UCU CG UUUAG G GA - A A C A G UA |
| Stem-loop sequence | GCAUCUCUGUAGCGGCAAAGAGCAGAUCGAAGAUGAUUUGGCAUCUCUGUAGCAGCGGAGAGCAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017757382.1 |
|
2.5 | PREDICTED: Gossypium arboreum DNA replication ATP-dependent helicase/nuclease DNA2 (LOC108458113), transcript variant X2, mRNA | DNA replication ATP-dependent helicase/nuclease DNA2(LOC108458113) | coding protein | psRNATarget | |||||||||
| XM_017757381.1 |
|
2.5 | PREDICTED: Gossypium arboreum DNA replication ATP-dependent helicase/nuclease DNA2 (LOC108458113), transcript variant X1, mRNA | DNA replication ATP-dependent helicase/nuclease DNA2(LOC108458113) | coding protein | psRNATarget |