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BaseInfo

ncRNA ID	ath-miRf10980-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGUACAUCACUUUUAGUGUA - NA
Stem-loop(if miRNA)	---   U    G ACACUUGGAUUGUACAUCACUUUUAGUGUACAAAUGUA   AAA GUAC C ||||||||||||||||||||||||||||||||||||||   ||| |||| U UGUGAACCUAACAUGUAGUGAAAAUCACAUGUUUAUAU   UUU UAUG G                                       AUA   U    U
Stem-loop sequence	ACACUUGGAUUGUACAUCACUUUUAGUGUACAAAUGUAAAAUGUACGCUGUGUAUUUUUAUAUAUAUUUGUACACUAAAAGUGAUGUACAAUCCAAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT029363.1	ncRNA:20   AUGUGAUUUUCACUACAUGU   1   *||||||=|||||||||||| targets:340   AACACUAGAAGUGAUGUACA   359 Target Full Sequence	1.5	Arabidopsis thaliana At1g09030 mRNA, complete cds	NA	coding protein	psRNATarget
NM_100774.2	ncRNA:20   AUGUGAUUUUCACUACAUGU   1   *||||||=|||||||||||| targets:342   AACACUAGAAGUGAUGUACA   361 Target Full Sequence	1.5	Arabidopsis thaliana nuclear factor Y, subunit B4 (NF-YB4), partial mRNA	nuclear factor Y, subunit B4(NF-YB4)	coding protein	psRNATarget
BX813709.1	ncRNA:20   AUGUGAUUUUCACUACAUGU   1   |||||||||||||*|||||| targets:1803   UACACUAAAAGUGUUGUACA   1822 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_001334229.1	ncRNA:20   AUGUGAUUUUCACUACAUGU   1   |||||||||||||*|||||| targets:2103   UACACUAAAAGUGUUGUACA   2122 Target Full Sequence	1.5	Arabidopsis thaliana glutamate decarboxylase 2 (GAD2), partial mRNA	glutamate decarboxylase 2(GAD2)	coding protein	psRNATarget
BT004136.1	ncRNA:20   AUGUGAUUUUCACUACAUGU   1   *|*|=|=||||||||||||| targets:2774   AAAAUUGAAAGUGAUGUACA   2793 Target Full Sequence	3.0	Arabidopsis thaliana clone RAFL15-11-P18 (R20716) putative myotubularin (At3g10550) mRNA, complete cds	NA	coding protein	psRNATarget
NM_111891.7	ncRNA:20   AUGUGAUUUUCACUACAUGU   1   *|*|=|=||||||||||||| targets:2946   AAAAUUGAAAGUGAUGUACA   2965 Target Full Sequence	3.0	Arabidopsis thaliana Myotubularin-like phosphatases II superfamily (MTM1), mRNA	Myotubularin-like phosphatases II superfamily(MTM1)	coding protein	psRNATarget