ncRNA ID | novel_gar_miR387 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:18569836-18569997 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGACACAGGCUGGCACAUGGGCGU - 24 |
Stem-loop(if miRNA) |
--  G    CC      A    -  -         CAUACU    AG         -----CUC  GGGUACCUUUUGAAUUAAG   GU UAUG  UCAGCU UGUG CG ACACACGGU      GCAC  CCGUGUGUC        UA                   G   || ||||  |||||| |||| || |||||||||      ||||  |||||||||        ||   CG GUAC  GGUCGG ACAC GU UGUGUGCCA      UGUG  GGCACACAG        CA                   C UG  G    AC      -    A  A         AUCAUC    CA         AUCCGGUA  GUUUUGACAUCCCAUAUGA |
Stem-loop sequence | GUGUAUGCCUCAGCUAUGUGCGACACACGGUCAUACUGCACAGCCGUGUGUCCUCUAGGGUACCUUUUGAAUUAAGGCAGUAUACCCUACAGUUUUGACAUGGCCUAGACACACGGACGUGUCUACUAACCGUGUGUAUGACACAGGCUGGCACAUGGGCGU |