| ncRNA ID | novel_gar_miR383 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:25916362-25916575 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 191 - AUGAUUGUAUGAAAUAGUGACGCC - 214 |
| Stem-loop(if miRNA) |
--AU C C C C A A CA CAGU UAAUUUAGAUUUGA GAUUGUAUGAAAUAGUGACG CA GUCA UUGUAUUCCUUU UAAUAGU UUAUGUUA AUCAGUAUUCUUA CUGAAUUU AUUU U |||||||||||||||||||| || |||| |||||||||||| ||||||| |||||||| ||||||||||||| |||||||| |||| CUAACAUACUUUGUUACUGC GU CAGU GACAUAGGGAAA GUUAUCA AAUACAGU UAGUCAUAAGAAU GAUUUAAA ACUA U UUUC A U A A A G AG --AU AAAUAGUACUUUUU |
| Stem-loop sequence | AUGAUUGUAUGAAAUAGUGACGCCACGUCACUUGUAUUCCUUUCUAAUAGUAUUAUGUUAAAUCAGUAUUCUUACACUGAAUUUCAGUAUUUUAAUUUAGAUUUGAUUUUUUUCAUGAUAAAAUCAUAAAAUUUAGGAUAAGAAUACUGAUGUGACAUAAAACUAUUGAAAAGGGAUACAGAUGACUUGACGUCAUUGUUUCAUACAAUCCUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017758885.1 |
|
2.5 | PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA | enolase-like(LOC108459500) | coding protein | psRNATarget | |||||||||
| XM_017758885.1 |
|
2.5 | PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA | enolase-like(LOC108459500) | coding protein | psRNATarget | |||||||||
| XM_017787352.1 |
|
3.0 | PREDICTED: Gossypium arboreum protein phosphatase 2C 77-like (LOC108483750), mRNA | protein phosphatase 2C 77-like(LOC108483750) | coding protein | psRNATarget |