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BaseInfo

ncRNA ID novel_gar_miR381
Species Gossypium arboreum
Class miRNA
Genome position Chr1:106529923-106530058 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CAUAUCAGGAAGUAGAAUUGGCAG - 24
Stem-loop(if miRNA) --             A                 A         UU    U    AG    UGG    A
  CAUAUCAGGAAGU GAAUUGGCAGUGAAGAA GAAGUAGGG  UUGA AGUU  CAGA   UAUG G
  ||||||||||||| ||||||||||||||||| |||||||||  |||| ||||  ||||   ||||
  GUAUAGUUCUUCA CUUAACCGUUACUUUUU CUUCGUCCU  AGCU UCGG  GUUU   GUAU U
UU             G                 C         UC    U    CA    UGG    U
Stem-loop sequence CAUAUCAGGAAGUAGAAUUGGCAGUGAAGAAAGAAGUAGGGUUUUGAUAGUUAGCAGAUGGUAUGAGUUUAUGGGUUUUGACGGCUUUCGACUUCCUGCUUCCUUUUUCAUUGCCAAUUCGACUUCUUGAUAUGUU