| ncRNA ID | novel_gar_miR377 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:34695650-34695752 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587;SRR1029588;SRR3180715;SRR3180719;SRR3180720;SRR3180721;SRR959748;SRR959750;SRR1029586 |
| Length | 22 |
| Mature sequence(if miRNA) | 82 - UUGGACAGAGUAAUCACGGUCG - 103 |
| Stem-loop(if miRNA) |
-- U C UCU UU AU UUAUU UUGGACAGAGUAA CACGGU GAUUU C AAUCU GUUUGAA C ||||||||||||| |||||| ||||| | ||||| ||||||| U AAUCUGUCUCAUU GUGCCA CUAAG G UUAGA CAAAUUU C CU - A -UU UU -- UUUCU |
| Stem-loop sequence | UUGGACAGAGUAAUCACGGUCGAUUUUCUCUUAAUCUAUGUUUGAAUUAUUCUCUCUUUUUUAAACAGAUUUUGUUGAAUCAACCGUGUUACUCUGUCUAAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017747493.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108450057 (LOC108450057), transcript variant X2, mRNA | uncharacterized LOC108450057(LOC108450057) | coding protein | psRNATarget | |||||||||
| XM_017747492.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108450057 (LOC108450057), transcript variant X1, mRNA | uncharacterized LOC108450057(LOC108450057) | coding protein | psRNATarget |