Search result

BaseInfo

ncRNA ID novel_gar_miR376
Species Gossypium arboreum
Class miRNA
Genome position Chr11:35361704-35361764 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 38 - AAAGAUCAUGGUCUUUAGUGGCGU - 61
Stem-loop(if miRNA) --          GU              GU
  AAAGAUCAUG  CUUUAGUGGCGUUU  G
  ||||||||||  ||||||||||||||  G
  UUUCUGGUAC  GAAAUCGCCGCGAA  G
GA          UG              AA
Stem-loop sequence AAAGAUCAUGGUCUUUAGUGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAUGGUCUUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:24   UGCGGUGAUUUCUGGUACUAGAAA   1
  |||||||||*|||*||||||||||
targets:1373   ACGCCACUAUAGAACAUGAUCUUU   1396

2.5 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget