Search result

BaseInfo

ncRNA ID ath_circ_025853
Species Arabidopsis thaliana
Class circRNA
Genome position 5:6649602-6650619[+]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence TTTAGACCAGTTCCCCACAAAGCTCGTTGTCGTCATCGCGCGAGCTTGAACCAAAAAAACCATGAACAGTGAGAAGGAAGACGAGCCATTGGAAGAGATCCGGAAGAAACCGTATCAAAGTTGTTAACCTGTGTGGGCTCAAATGCATAAAAAAGATTAGCTTGCAGAGCAATCGATTGACCTCTATGAAAGGATTTGAG
Tissues whole_plant
Exon boundary No-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence TTTAGACCAGTTCCCCACAAAGCTCGTTGTCGTCATCGCGCGAGCTTGAACCAAAAAAACCATGAACAGTGAGAAGGAAGACGAGCCATTGGAAGAGATCGGCGATTCGAATAATGTTCTCGATCTCACTAGCTATCAGCTCCACAGTCTCGATACGGTCGAGTTACCGCCGAACCTGATTGAGCTGGACCTTACGGCGAACCGTTTGTCGGGATTGGACTCGAGGATCGCTCAGCTCTCCACGCTTAAGAAGCTTTCTCTCCGCCAAAACCTAATTGATGATTCCGCCGTCGAACCGTTGTCTCACTGGGACGCCTTGTCCGATCTCGAGGTGATTCTCGACTCTCTGATTTATCTTTTGAGTGATTTTGTAAATGGTGAAATATCTAGGCATCTGATTTTGTTTTTGGCCGTGGAACGTTATGATTTTGGCTAATTGCCTTTTGCATTTCACTTTTGATTTTCACTAGAATTGAAAATTGGCATTGATAGTCTGAGAGGCATAGTTATTTGTGGGCAGTGGATAAAGAAGAGTGTTTCTTGCTATAATTTATGCAGGAGTTAGTTCTCAGAGATAACAAGCTAGCGAAAGTACCAGATGTCAGCATATTCACGAAGCTTTTGGTTTACGACATATCTTTCAATGAAATCACTTCTTTGGAAGGAATATCCAAGGCCTCTAGCACACTGAAGGAACTCTATGTGTCTAAAAATGAAGTTAACAAGATTATGGAGATTGAACACTTACACAACTTGCAGATTCTTGAACTGGGGTCTAATAGATTGCGGGTTTGTCCCTCCCTCCTCTTTGATATTTTTTTATTCTCTTTACAGTGCTTCAGCAATGAATTTGAAAGCATTGAGGTTTCAGGTGATGGAAAATCTGGAAAACTTCACAAAATTAGAAGAACTATGGCTCGGAAGAAACCGTATCAAAGTTGTTAACCTGTGTGGGCTCAAATGCATAAAAAAGATTAGCTTGCAGAGCAATCGATTGACCTCTATGAAAGGATTTGAG