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BaseInfo

ncRNA ID	ath-miRf10978-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAUUAAUGCAGUGAAAGUGAC - NA
Stem-loop(if miRNA)	U  A            G            AAC A     --    ACUG   CCG        GC UUGAUUAAUGCA UGAAAGUGACUA   C GGGUU  GAUU    UUU   CUUCAUC  || |||||||||||| ||||||||||||   | |||||  ||||    |||   ||||||A  CG AGCUAGUUACGU ACUUUCACUGAU   G CCCAA  CUAA    AAA   GAAGUAU A  C            A            GUA C     GG    -AAA   CAA
Stem-loop sequence	UGCAUUGAUUAAUGCAGUGAAAGUGACUAAACCAGGGUUGAUUACUGUUUCCGCUUCAUCAUAUGAAGAACAAAAAAAAUCGGAACCCCGAUGUAGUCACUUUCAAUGCAUUGAUCGACGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001341830.1	ncRNA:21   CAGUGAAAGUGACGUAAUUAG   1   *|||||||||*|||||||||| targets:898   AUCACUUUCAGUGCAUUAAUC   918 Target Full Sequence	1.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT4G26800)	coding protein	psRNATarget
NM_001341831.1	ncRNA:21   CAGUGAAAGUGACGUAAUUAG   1   *|||||||||*|||||||||| targets:614   AUCACUUUCAGUGCAUUAAUC   634 Target Full Sequence	1.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT4G26800)	coding protein	psRNATarget
BX828174.1	ncRNA:21   CAGUGAAAGUGACGUAAUUAG   1   *|||||||||*|||||||||| targets:600   AUCACUUUCAGUGCAUUAAUC   620 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_118814.3	ncRNA:21   CAGUGAAAGUGACGUAAUUAG   1   *|||||||||*|||||||||| targets:600   AUCACUUUCAGUGCAUUAAUC   620 Target Full Sequence	1.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT4G26800)	coding protein	psRNATarget