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BaseInfo

ncRNA ID novel_gar_miR369
Species Gossypium arboreum
Class miRNA
Genome position Chr13:37247359-37247517 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - CAUGCCUGUGUGGCCUGGGACAUG - 24
Stem-loop(if miRNA) --    CCU     -   UG  A    ----CCC   U  CC      UG  --GC         CGUG   CCAGCCUGUGGG
  CAUG   GUGUG GCC  GG CAUG       GUC GG  UGCCCG  GG    UCCCAUGGC    GGG            C
  ||||   ||||| |||  || ||||       ||| ||  ||||||  ||    |||||||||    |||            A
  GUAC   CGCAC CGG  CC GUAC       CAG CU  ACGGGU  CC    AGGGUGCCG    CAC            G
GU    --C     A   GU  G    ACCUUUU   U  UA      GU  AAUC         -ACA   UUGUUCAGUAUA
Stem-loop sequence CAUGCCUGUGUGGCCUGGGACAUGCCCGUCUGGCCUGCCCGUGGGGCUCCCAUGGCCGUGGGGCCAGCCUGUGGGCAGAUAUGACUUGUUCACACAGCCGUGGGACUAACCUGUGGGCAAUUCUGACUUUUCCACAUGGCCUGGGCACACGCCCAUGUG