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BaseInfo

ncRNA ID novel_gar_miR367
Species Gossypium arboreum
Class miRNA
Genome position Chr11:1790135-1790328 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 23
Mature sequence(if miRNA) 172 - CUAAAGGUCCUGGUCUUUGGCGG - 194
Stem-loop(if miRNA) --  A    CA    -                 UAA               AG AC  UUUUG      CAU            -C       AA  UA
  GC AAAG  CGGG UCUUUAGCGGUAUUUUU   AAAAGCGCCGCUAAA  U  GG     UAGUGG   UUUUUAUAAAAG  GCCGCUA  AG  C
  || ||||  |||| |||||||||||||||||   |||||||||||||||  |  ||     ||||||   ||||||||||||  |||||||  ||  G
  CG UUUC  GUCC GGAAAUCGCCGUGAGAA   UUUUUGCGGCGAUUU  G  CC     AUCGCC   GAAAAUAUUUUU  CGGCGAU  UC  A
GG  G    UG    U                 -UA               CU GU  UGGAA      -CC            UA       -G  UU
Stem-loop sequence GCAAAAGCACGGGUCUUUAGCGGUAUUUUUUAAAAAAGCGCCGCUAAAAGUACGGUUUUGUAGUGGCAUUUUUUAUAAAAGCGCCGCUAAAAGUACGAUUCUGUAGCGGCAUUUUUUAUAAAAGCCCCGCUAAAGGUCCUGGUCUUUAGCGGCGUUUUUAUAAGAGUGCCGCUAAAGGUCCUGGUCUUUGGCGG