ncRNA ID | novel_gar_miR367 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:1790135-1790328 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 23 |
Mature sequence(if miRNA) | 172 - CUAAAGGUCCUGGUCUUUGGCGG - 194 |
Stem-loop(if miRNA) |
--  A    CA    -                 UAA               AG AC  UUUUG      CAU            -C       AA  UA   GC AAAG  CGGG UCUUUAGCGGUAUUUUU   AAAAGCGCCGCUAAA  U  GG     UAGUGG   UUUUUAUAAAAG  GCCGCUA  AG  C   || ||||  |||| |||||||||||||||||   |||||||||||||||  |  ||     ||||||   ||||||||||||  |||||||  ||  G   CG UUUC  GUCC GGAAAUCGCCGUGAGAA   UUUUUGCGGCGAUUU  G  CC     AUCGCC   GAAAAUAUUUUU  CGGCGAU  UC  A GG  G    UG    U                 -UA               CU GU  UGGAA      -CC            UA       -G  UU |
Stem-loop sequence | GCAAAAGCACGGGUCUUUAGCGGUAUUUUUUAAAAAAGCGCCGCUAAAAGUACGGUUUUGUAGUGGCAUUUUUUAUAAAAGCGCCGCUAAAAGUACGAUUCUGUAGCGGCAUUUUUUAUAAAAGCCCCGCUAAAGGUCCUGGUCUUUAGCGGCGUUUUUAUAAGAGUGCCGCUAAAGGUCCUGGUCUUUGGCGG |