Search result

BaseInfo

ncRNA ID novel_gar_miR358
Species Gossypium arboreum
Class miRNA
Genome position Chr1:1877579-1877784 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 183 - AGGGCAUGCAAUAAUUAUGAAGCC - 206
Stem-loop(if miRNA) --A GG    -C             CC    AAAU U      --        AAA       AA     UA             AC     -  A       ACGU
   G  CAUG  AAUAAUUAUGAAG  ACCU    G GCGAGG  AUUCAAAC   CAACUUG  GCAUA  AGACCAUUUGCCU  AAUCA AG UACCAUU    A
   |  ||||  |||||||||||||  ||||    | ||||||  ||||||||   |||||||  |||||  |||||||||||||  ||||| || |||||||
   C  GUAC  UUAUUAAUACUUC  UGGA    C CGUUCC  UGAGUUUG   GUUGGAU  CGUAU  UCUGGUGAAUGGA  UUGGU UC AUGGUGA    G
UAA AU    UC             AA    --AU U      CU        GUG       AC     -C             CA     A  -       ACCC
Stem-loop sequence AGGGCAUGCAAUAAUUAUGAAGCCACCUAAAUGUGCGAGGAUUCAAACAAACAACUUGAAGCAUAUAAGACCAUUUGCCUACAAUCAAGAUACCAUUACGUAGCCCAAGUGGUACUAUGGUUACAGGUAAGUGGUCUCUAUGCCAUAGGUUGGUGGUUUGAGUUCCCUUGCUCUAAGGUAACUUCAUAAUUAUUCUCAUGUACAAU