ncRNA ID | novel_gar_miR358 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:1877579-1877784 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 183 - AGGGCAUGCAAUAAUUAUGAAGCC - 206 |
Stem-loop(if miRNA) |
--A GG    -C             CC    AAAU U      --        AAA       AA     UA             AC     -  A       ACGU    G  CAUG  AAUAAUUAUGAAG  ACCU    G GCGAGG  AUUCAAAC   CAACUUG  GCAUA  AGACCAUUUGCCU  AAUCA AG UACCAUU    A    |  ||||  |||||||||||||  ||||    | ||||||  ||||||||   |||||||  |||||  |||||||||||||  ||||| || |||||||    C  GUAC  UUAUUAAUACUUC  UGGA    C CGUUCC  UGAGUUUG   GUUGGAU  CGUAU  UCUGGUGAAUGGA  UUGGU UC AUGGUGA    G UAA AU    UC             AA    --AU U      CU        GUG       AC     -C             CA     A  -       ACCC |
Stem-loop sequence | AGGGCAUGCAAUAAUUAUGAAGCCACCUAAAUGUGCGAGGAUUCAAACAAACAACUUGAAGCAUAUAAGACCAUUUGCCUACAAUCAAGAUACCAUUACGUAGCCCAAGUGGUACUAUGGUUACAGGUAAGUGGUCUCUAUGCCAUAGGUUGGUGGUUUGAGUUCCCUUGCUCUAAGGUAACUUCAUAAUUAUUCUCAUGUACAAU |