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BaseInfo

ncRNA ID novel_gar_miR354
Species Gossypium arboreum
Class miRNA
Genome position Chr9:52626690-52626756 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - ACUAUAGAACAUGAUCUUUAGCGG - 24
Stem-loop(if miRNA) --A   U                        GU
   CUA AGAACAUGAUCUUUAGCGGCAUUU  A
   ||| ||||||||||||||||||||||||  G
   GAU UCUUGUACUAGAAAUCGCCGUGAA  G
CCA   U                        AA
Stem-loop sequence ACUAUAGAACAUGAUCUUUAGCGGCAUUUGUAGGAAAAGUGCCGCUAAAGAUCAUGUUCUUUAGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:24   GGCGAUUUCUAGUACAAGAUAUCA   1
  |||||||||||||||||||*||||
targets:1505   CCGCUAAAGAUCAUGUUCUUUAGU   1528

1.5 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget