ncRNA ID | novel_gar_miR354 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:52626690-52626756 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUAUAGAACAUGAUCUUUAGCGG - 24 |
Stem-loop(if miRNA) |
--A   U                        GU    CUA AGAACAUGAUCUUUAGCGGCAUUU  A    ||| ||||||||||||||||||||||||  G    GAU UCUUGUACUAGAAAUCGCCGUGAA  G CCA   U                        AA |
Stem-loop sequence | ACUAUAGAACAUGAUCUUUAGCGGCAUUUGUAGGAAAAGUGCCGCUAAAGAUCAUGUUCUUUAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768165.1 |
|
1.5 | PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA | diphthamide biosynthesis protein 2-like(LOC108467522) | coding protein | psRNATarget |