Search result

BaseInfo

ncRNA ID ath_circ_025495
Species Arabidopsis thaliana
Class circRNA
Genome position 5:5583628-5586405[-/-]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence CTTGCCGGGAGCGTAAGCTTGAGCAAGAGCAGAGGAGGGATCAGGTTTCCCCATGCGAGACCGCATATAAGGATCGCATGACAGGTAGAGATTCTTCACATATACTCCTCCCATCCAACTATCCCCCAGAGTAAGTCACCTTTCTTGTAATCTGGATGCCCAGATTCTATAACTCTAGACACTCCATACCCAAAGATTGG
Tissues root, inflorescences, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTGCCGGGAGCGTAAGCTTGAGCAAGAGCAGAGGAGGGATCAGGTTTCCCCATGCGAGACCGCATATAAGGATCGCATGACAGGTAGAGATTCTTCACAAGAACCGATTTAGAACCTTCCGGAACCCTAAGTTCGACGGTGGTGGTGGTGAAATTGAAATCGGATTCCTTAGGGAAACCACTCACGTGGTCTTTGAATATGACCTGCTTGTTCGTCGTCATCGTTGTTATTCTCCGATTCAACTTCTGATTTCCACCAATTTGTTACTTCTTCTTCTTCTTCTTCGAGGACGCGCCTGCTTTTTATAGTGGCCTCTCACTCGTAATATCAAGTATGAAGTCACTGCTCATGATGATTCATCACAATATGTTCACAATTTTTAAACTCTTTCGAGCGTTTTTATTGTTGACACTTTCACATTTTGTGATATATTTTCATTTCCTTTCACATTTCATTTTCTTTCCAATTCTCTCTTCTGTCACATTTTCACAAGAGTTGGTGTTTATACATTACTGATATAGGAAAAGGATGGTGATAAATGAGTGACACGTGGACGGTGGTAATTGAAGATTAAAAGCAACGGTCAATATTAAGAACAGAAGAATGAGGTCAATAAGAAGCTGAAGACACTTCATTATGCTAAAATCTGAGATTGTATCTTCTTCTTCATTTTGTTCTCTGTTACTACTTGAGAATTCTCTGTAATTCTCAAGCTATTCCTCATCGTTTACCGGAGCTTCTCTCTTGAGACTCTTGTAGATGAGAAGTTGATGTTGCGTTTCATGAACGTCGTATCAAATTATCAATCTATATCTTTCGAATCCATTTTCCTCTTTATTATCTGATTTACGTTATCAATTACAAAAGAACACACCTCATCGTTTTAGAGACATTTGGCTTCAATTTCCTCAAGTGTCAAGTGTGGTCCCTTTGTCTCTGGAACATCGAAGATTCTTAAGACCAGAGACAAAACACATATCACACCAAACCCACAAAACAGTATCCCAGCTCCAAATAGTTCTCGCAAAACAGAGCCATGTGATTGTTAATCGTGATGTCCTCTAATAAAGAAGAAAAGGAGTTGCACAAATAGCAACACTAACTTAATTACATTTTTGAATTTGTGAGAGGGGTTTGAGATTGTTTGTTACTACCTTGATACATTTGAATTTGATAAACAAGTCACACAGAAAATGATTCAAAACCATAACGAACGAACAAATTGATACATATTAAAAAATTACTTGAATTACTAGTAATCTAGTATTTATAAACCAAAACCTCAGGCTTGGATTCGAACACCCATACAAAATCTTTTGGATACATACAACATTACTCCCATAGATATATATATTCACTCACGAGCAATAACAACAACTTGTTTTCCAACGTTCTTACCATGGAAGAGTCCCACAAGAGCTTCAGGACCTTTCTCAAGCCCATCAGCTACATCTTCCACGTACGTGATCTTCCCTTCTTTAATGTGCGGAAGCACAAAATCCAAGAACTTTGAGTATTTCTCGTAGAAATCAAACACTGCAAAGCCTTGAATGCGGATTCTTTTGTAGATTATGTTGGATAGGTTGTGTACACCTTCTTGGTTTTCAAGATTGTACTGTGAGATCATTCCACACACAGCGATACGTCCGTGTGGGTTCATGTTTAATAGCACTGCGTCTAGCATTTTGCCTCCTACGTTTTCAAAGTATATGTCAATGCCTGTAGGGAAACACCTGCAAAAGATAAAGGAGAGAGAATGTCTCTTAGATTAGTCAAACAGCAGTTGATAAACCTTAGATTACTCATTGGTTTGACCAGCCTGTTGTCAAGGCCGGCTCTGGATCATGGTGTTCATGCTTTGATCAATTTCTTTTGTTTCTACTTTAGTTGTGAATTGCCGCTTTCTTATGTAAACCGATCCTAACAGTTAAAGACATCAAGCGCTTAGAAATAAGTAGTTCACTGAACCTTTTGAGGGCAGCACTAAGGTCTGGTTCTTCCTTGTAGTTAAATGCATCATCAAACCCAAACTTGGTCTTCAGAAGATCAACCTAGCAAATCCCGAAAAAGGAAGTAATTGGGCAAGTCATTCTCCTGAAGGAAAACCAAGAAATAAAAGGATACAAATTGTCCATCATCTCACCTTCTCTGTACTTCCGGCGCTTCCAACAACATAACAGCCCATCATCTTAGCAAATTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACACATAAACTGTCTCTCCTTCCTTTGGAGAACAAACTTCATAAAACCCAGCATAGGCAGTCATACCAGGCATACCTATTAGGACAGGACACAACCATGAAACAGTGAATATATGAAACAGATCAACAAACCAAACAGTTGAAACTCTAGTCTTCTAGATTGCAGTTATAATTAATTCCCTTCCTACGTTTCAAACAACGTTTCTAATTTTGTTAGACATCTATAAAGTTTATGACATTCAACAACATGATCACTGTCTCAAGCCAGAACTTTGTATATCAAGAAGCAGATTTCCTAAATTTACAGAGTGATTCCAGTTACAAAACTAGGAAAAAAGGCCGAGATATATTAATTAACATACCGAGAAGTCCAGTGTAGTAAGATAATGGAATATCGGTATGTTGGATCTTGAAATGCATGTGAGTCATTGGAGTAATAACACTATACTCCTCCCATCCAACTATCCCCCAGAGTAAGTCACCTTTCTTGTAATCTGGATGCCCAGATTCTATAACTCTAGACACTCCATACCCAAAGATTGG