Search result

BaseInfo

ncRNA ID	ath_circ_025464
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:5531310-5532499[+]
Reference genome	TAIR10
Source	PlantcircBase
Method	find_circ
Type	exonic
Splice junction sequence	GGTTTCAGAAAAGTTGATCCTGACCGATGGGAATTTGCAAATGAAGGATTTCTTAGAGGCCGAAAACAACTACTGAAGAGTATTGTCAGGAGAAAACCTTTGGAACAAGAACCAAACGAGTGGACCCGTAATGAACAACAAATGAAGTATCTTACTGAACAAATGGGACTGCTTTCCTCAGAAGCACAGAGGAAATAAAG
Tissues	leaf
Exon boundary	Yes-Yes
Splicing signals	AG-GT
circRNA sequence	NA
Genomic sequence	GGTTTCAGAAAAGTTGATCCTGACCGATGGGAATTTGCAAATGAAGGATTTCTTAGAGGCCGAAAACAACTACTGAAGAGTATTGTCAGGAGAAAACCTTCGCATGTGCAGCAGAATCAGCAACAAACTCAAGTTCAGAGCTCATCTGTTGGTGCTTGTGTCGAGGTGGGGAAGTTTGGAATAGAAGAAGAAGTGGAAAGACTTAAGCGGGATAAGAATGTTCTTATGCAAGAACTCGTCAGGTTAAGGCAGCAACAGCAAGCTACTGAAAACCAACTGCAGAATGTGGGACAGAAAGTTCAGGTGATGGAGCAAAGGCAACAACAAATGATGTCGTTTTTAGCAAAGGCTGTTCAAAGTCCAGGTTTCTTAAACCAGTTAGTACAACAGAATAATAATGATGGCAACAGACAAATTCCAGGAAGCAACAAAAAGAGGAGACTTCCTGTAGATGAGCAGGAGAATCGTGGTGACAATGTGGCTAATGGTCTTAACCGCCAGATTGTTAGATATCAGCCGTCGATAAACGAAGCAGCACAAAATATGCTTCGACAGTTCTTAAATACTAGTACCTCACCTCGGTATGAATCAGTTTCAAACAATCCTGACAGTTTCCTATTGGGTGATGTTCCCAGTTCTACCTCTGTAGACAATGGGAACCCTTCAAGTAGAGTTTCTGGAGTAACATTGGCCGAGTTTTCACCCAACACAGTTCAGTCAGCAACGAATCAAGTACCCGAAGCAAGTTTGGCTCATCATCCTCAAGCTGGTCTGGTTCAGCCAAATATAGGTCAAAGTCCGGCTCAAGGAGCAGCACCTGCAGACTCTTGGAGCCCTGAATTTGATTTAGTTGGATGCGAGACAGATAGTGGAGAGTGTTTTGATCCAATAATGGCTGTTTTAGATGAGTCAGAAGGCGATGCAATTTCTCCTGAAGGTGAGGGCAAGATGAATGAGTTACTGGAGGGAGTCCCTAAGCTGCCCGGAATCCAAGATCCATTCTGGGAACAGTTCTTTTCTGTTGAACTCCCAGCGATTGCAGATACAGACGATATTCTATCAGGATCAGTGGAGAATAATGACTTGGTATTGGAACAAGAACCAAACGAGTGGACCCGTAATGAACAACAAATGAAGTATCTTACTGAACAAATGGGACTGCTTTCCTCAGAAGCACAGAGGAAATAAAG