ncRNA ID | novel_gar_miR334 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:37288272-37288317 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588 |
Length | 21 |
Mature sequence(if miRNA) | 26 - AAGUGGCUGAAGGCCUUGCUA - 46 |
Stem-loop(if miRNA) |
--A     C    G    -U   A    AGUGG UGAA GCCU  GCU U    ||||| |||| ||||  |||    UUACU ACUU UGGA  CGA C AUC     -    G    UU   G |
Stem-loop sequence | AAGUGGCUGAAGGCCUUGCUAUCGAGCUUAGGUGUUCAUCAUUCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017782736.1 |
|
2.5 | PREDICTED: Gossypium arboreum protein ASPARTIC PROTEASE IN GUARD CELL 1-like (LOC108479893), transcript variant X1, mRNA | protein ASPARTIC PROTEASE IN GUARD CELL 1-like(LOC108479893) | coding protein | psRNATarget |