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BaseInfo

ncRNA ID novel_gar_miR334
Species Gossypium arboreum
Class miRNA
Genome position Chr9:37288272-37288317 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588
Length 21
Mature sequence(if miRNA) 26 - AAGUGGCUGAAGGCCUUGCUA - 46
Stem-loop(if miRNA) --A     C    G    -U   A
   AGUGG UGAA GCCU  GCU U
   ||||| |||| ||||  |||
   UUACU ACUU UGGA  CGA C
AUC     -    G    UU   G
Stem-loop sequence AAGUGGCUGAAGGCCUUGCUAUCGAGCUUAGGUGUUCAUCAUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017782736.1
ncRNA:21   AUCGUUCCGGAAGUCGGUGAA   1
  *||||||**||||||||||||
targets:1971   GAGCAAGAGCUUCAGCCACUU   1991

2.5 PREDICTED: Gossypium arboreum protein ASPARTIC PROTEASE IN GUARD CELL 1-like (LOC108479893), transcript variant X1, mRNA protein ASPARTIC PROTEASE IN GUARD CELL 1-like(LOC108479893) coding protein psRNATarget