Search result

BaseInfo

ncRNA ID	ath_circ_025442
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:5468973-5472726[-]
Reference genome	TAIR10
Source	PlantcircBase
Method	NA
Type	exonic
Splice junction sequence	GCTGGCAATTCGAAGGAAGCTGGTTGGATGCAAAAATCAAAAGGTCAACGTTATCGAGATTTCCTTTCAGGGCTAAATCGTTCTTGATCATGTTATCTACTGCATGATGAACAAGGAGCAGAACAAACATTACAAGTTCCAGACTCCACTTTTGAAAAACCTCTCTGACCCATTTGGCGCTTACCAACTCTTCTATCAGC
Tissues	whole_plant
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	GCTGGCAATTCGAAGGAAGCTGGTTGGATGCAAAAATCAAAAGGTCAACGTTATCGAGATTTCCTTTCAGGGCTAAATCGTTCTTGATCATGTTATCTACCAGAGGCTTATAATTTCTCTCATAACTGTTTCACAATATTTAAGAGTTAAACATTAAGACCACCAACATGAAGTAAAAGCAAGTAAATAATCATGTAGGAAACCTACCTCTCAGTGTCCTTTGCAAAGAAGAATAGAGCTATATGGGCTTCCTTAGTACCTAATTTTTCAAATTGTGTAGGCCATGTACTCTTCCGAGGTACTTCATTCAAACTGAAAGTTTCTGGAAATTTATTCACCACTTCAGCAACCCTGGGTGATGCTAAGGTTGATAAATGTGCTTGAATTCCGCTATGCATAGCTGACTGGTTTATGATTTTCCGCACCTCTAAGTCCCCCCTGGAAAAATGATACAAGAACTTCAAGTCAAAAATGCATTACATGGACATATATAAAAGGTATGCCTCGACAAAAAAAGTAATAAACACCAAAAAAAAAGAGAGCTTCTTCACCAAAAGAAAGGAAAACTTACTGCCATATAAACTCATGGTCCGGAATGGCTGAGCTTCTCAACATAACAGGTGAGGGAACTAAAGGCAAATCTCTCATGACAGGCTTTACGGCGGGAAAACTGACTTCAGGTTCCACCAATCGTGAAGGTATAGTATCAGCACCAGGGAATATAAGCTGCTTCTCATTTGTTACAATTGTCTGCTTGTACGGATCAGAAGTAGGCCATAAAATCGGATGCCCTCCTTGCAATCCTTCGTGTGACACATGATTCTTATGCATCTTTGAAGGCAATTGATTTCGTAGAGTCTTTTCAGAACTAGAATCCACATTAGCTACCAATGACGCATCAGATTGCTCCAATACTCTGTTCTTGCCAAAGCTGGGCTTTTTACGCAGAGCAGCATCTACTGCTGCTCGTAACCTATTACCCTTATTTAAATCCTCCTTAACGTTTTTCGTGGTAGAGAGATCACTATCAGACACGCCTGAGGTGTCGCTGGATTCTGCAGTCTGACCTCCCTTTTGAGATGATGGTAAGCCTTTTGCACCAGCCAACAGGCTAGACCTTTGGCGTTTACTGAAGGCTTCTTTGCTTTTCTTCCCTACCTCTCTAGGTACCCTGGACCGCGGCAATCCATCCTGTAAAGCTACAGTACCGTGGTTTGGCATGCCTTCACCCGTACAAGAAGTGGATGGCAGTTCATCCTTACAGTCAGCTTGACTTGAACTTTGCTCGCTGGCACTGCACTTTTCATTTGTGGAAATATCTCCTCCTGCTCAAGGAACAAAGATATAACAATGGAGCTCAGTCATAATATCTTAAAAAGGGAGGGTTCATAAATTAAAACGATCCAAAACATATCCAACCAAAGTACTATCAAAGAAAGTAGCAGAAGTACCAATTTATTGACAAAAATGATAAGTATCATACCCGAAACAACTGAATTTTCTAGACGGTTTCGGCTTAGATTGCTGACTTGTTTCGTCAAGTTACCTCGTTTACCATCAGACTGCAAACCCTTTAAATCACGATTATTGTTTGCATGTGAAACAGACGAATTGCCGCGTGACTTTAACTTCTGATCAATGGAGGATGCTGATGCATTAGCTTCTCTATTACGATCTTTCACTTGCTTTAAGCTTTTGCCTTCTTGTGAATGATAAACTTTTGATCCAAGCATTTTTGCTTGTGAGTCGCTTCCACCAGAATTCCCTGCATCTGTAGTTCTACTTGGCATTGACTTGCCTACATTTCTAAAACCCCCCACTTTTAAATCAAGTGCAGTATCTTCTTTGCCAGTCTTCTGTCTTGGGTGAATAGCATCATCCATAAGTTGCACTTTCGGTTTCGAGCTCGAACAATTAAAGGAACTGGATTTCAAAAATGCACCTAAAGAAACAAAAAACTAGTTATTCTAACCTGCAAAATCGCCAGAAATACAACAACAGAGATAAGGTAGAGTTGCGTTTAGGAAGAGCTATCCCATCATGCAGCCTACCTTTTGGAGGTTGGAGCTGTGAACCAGCAGATCGTGCACTTTCTGTGTCATCACTGAATGATGTTTGATGATTTAGCTTTCCCCTTAACCTGTCTAAGCCCTTGAATGATGTTTCCCGAGATAACGCACCTACTCTGGGGAGAATGGATTTCTTGGGTGAGCCAGTTGAAGCCTCAACCACCTGTCTTTTAGCATCTGGAGCGGCCTCAATTTTATCTGCGTGCCTTTTGCCAGAGCTATAAGTATTGAAGGTTACCTCAGTTTCTCTTTTTCTCTTAGCTTCTGCATGTTTCAACTTCAACTTCGTTAGACAAAATGGAAACAGCAAACGTGGATCCAAATTTATGCTAATTTATTCAGCTAATTCTTTTTTCACATATAGCATGTCCCGTTAAATATTCAGCTTTACCTTGCTTCTGCTTTTCAGCTTCCTCAGCACATTCTTCACATAGCCAATCACCCTCAGGAACTTCATCCAGCATTTCCCGCATGCAATAGCTAAGTAAAAGAAATACACAATTGTATTACTATCACAGAAAATCAATGGATAATATCTATCCAAAATAAAATATACTCCTAATATGCAGACAAATTCCAAATGGAAATTGGCCAATAGTATGCTTTCTCTACCATGAAAATAAGAGCAGGCTTACGTGTGTTCTGCCCCATCACTGCATCCGCTACAGATAGCGAGTAAATCTTCACGACCAGCATCTCCACAGATATCACAAACCTTTACCTATTCAGCGAAAAAAACCCCTTTCGCATGAGAATTATTTCAGTGAACAAATACTGCAACAAAGGAAGAAGTAGACGTGTTCCTAAGTTCTTCTAATATGAGACAAAACAGCATTACTTACATCATGTTCGACCATTTCAGAATCATCACTCTCGCTCTCAGACACAGCTGATGAGTTGGACGAAGAGCTCTTACTTGACTTACCATCCTTCCTGTTCTCTCCTGAACGCGTAGATCCTTCAACTGAAGGTTCCTGTCTCTCTTTGTTACCCCCGGGTCTTGATTTTTCCTTGAAATTTCCCTTCTCAGAACTGACTCTGTCATCATGGTTGGATGATGGATTCTGCAAAGATTCTAATTTCACTTCATCTTTCCTAGATCCACCCGGAATTGGATCAGAATTGAGAGCTGAACCATCAGCTAAATCCTTATTGCCAATCTCGTTATTAGAACAACCTGACTTCAACTGTTTGGCTCGATCAGCAGACAAGATCCCATCTTCCTGGTCTTCTATACAGTTAGAGCTCTGATCTAACATATTAGCTGATGCAGAAACTTTATGTTTCATCCTGCTCCCAGAAAGAGATGGCTTAGAAGTCATTGCAGCAGCTCCGGAATCATCTGATATCCCAGAACATCTTATAGTTTCCTTACTCTCAGCATTCTCAGAGAGAGCATCATGACTGGAATTGACAAGATTGCTTGCTTCACTAGCAGTGTTATTTAAACTCTTGTGAGCATTAACCATAGAAGAAGGCAAAAGATCATCCTCGTTTACAGAACACTGGCTGCCCACTACTCCATGACAGTTTTCATCTGATGACTCGTCCAACTTTGATCCTGTGAAACCAACATTACGGTGCATGCATGATGAACAAGGAGCAGAACAAACATTACAAGTTCCAGACTCCACTTTTGAAAAACCTCTCTGACCCATTTGGCGCTTACCAACTCTTCTATCAGC