ncRNA ID | novel_gar_miR330 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:39856749-39856907 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGGUCAUGGUCUUUAGUGGCGU - 24 |
Stem-loop(if miRNA) |
--          GU    GU      A   A   GCGGG                GU A   AA             GC   GCCGUUAAAG  CAUG  CUUUAG GGC UUU     AAAAGCGCCGCUAAAG  C UGG  UUUAGUGGUGUUU  G   ||||||||||  ||||  |||||| ||| |||     ||||||||||||||||  | |||  |||||||||||||  G   CGGUGAUUUC  GUAC  GAAAUC CCG GAA     UUUUUGCGGCGAUUUC  G ACU  AAAUCACCGCAAA  G UG          UG    UG      G   C   AAGGG                UG G   GG             AA |
Stem-loop sequence | GCCGUUAAAGGUCAUGGUCUUUAGAGGCAUUUGCGGGAAAAGCGCCGCUAAAGGUCAUGGAAUUUAGUGGUGUUUGCGGGAAAAACGCCACUAAAGGUCAGGGUCUUUAGCGGCGUUUUUGGGAAAAGCGCCGCUAAAGGUCAUGGUCUUUAGUGGCGU |