ncRNA ID | novel_gar_miR329 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:14972438-14972587 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 127 - GUCUCCGGAUCUGUUGAGGAUGGU - 150 |
Stem-loop(if miRNA) |
-UAUA     -       CU     U  AUGA     GCA   -     --AC         --       UGUGA   A      CUUCA CAGGUCC  AGAUA CA    CAUGA   CUG AUAUU    AAAUCCUGA  UUUCUCU     GCA G      ||||| |||||||  ||||| ||    |||||   ||| |||||    |||||||||  |||||||     ||| A      GGAGU GUCUAGG  UCUGU GU    GUAUU   GAC UGUAG    UUUAGGACU  AAGGAGA     UGU C UGGUA     U       CC     -  ---A     -AG   C     AAGU         CU       -UUUG   A |
Stem-loop sequence | UAUACUUCACAGGUCCCUAGAUAUCAAUGACAUGAGCACUGAUAUUACAAAUCCUGAUUUCUCUUGUGAGCAAGACAUGUGUUUAGAGGAAUCUCAGGAUUUUGAAGAUGUCCAGGAUUAUGAUGUGUCUCCGGAUCUGUUGAGGAUGGU |