Search result

BaseInfo

ncRNA ID novel_gar_miR326
Species Gossypium arboreum
Class miRNA
Genome position Chr9:14354454-14354574 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR3180715;SRR3180719;SRR3180720;SRR3180721;SRR1029586
Length 21
Mature sequence(if miRNA) 101 - UUAGAUGACCAUCAACAAACA - 121
Stem-loop(if miRNA) --      U              --       - -----AUCUCG    UUCUUUGUUCAAGCA
  UUUGUU AUGGUCAUCUAAGC  CAUUUUU C           CCAA               G
  |||||| ||||||||||||||  ||||||| |           ||||               U
  AAACAA UACCAGUAGAUUUG  GUAAAGA G           UAGC               U
AC      C              UA       C CCCACAUAAGA    CAAGCUAAUAGGUUU
Stem-loop sequence UUUGUUUAUGGUCAUCUAAGCCAUUUUUCAUCUCGCCAAUUCUUUGUUCAAGCAGUUUUUGGAUAAUCGAACCGAUAGAAUACACCCGCAGAAAUGAUGUUUAGAUGACCAUCAACAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017756718.1
ncRNA:21   ACAAACAACUACCAGUAGAUU   1
  ||||*||||||||||||||||
targets:261   UGUUCGUUGAUGGUCAUCUAA   281

1.0 PREDICTED: Gossypium arboreum SPX domain-containing membrane protein At4g22990 (LOC108457656), mRNA SPX domain-containing membrane protein At4g22990(LOC108457656) coding protein psRNATarget