ncRNA ID | novel_gar_miR326 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:14354454-14354574 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR3180715;SRR3180719;SRR3180720;SRR3180721;SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 101 - UUAGAUGACCAUCAACAAACA - 121 |
Stem-loop(if miRNA) |
--      U              --       - -----AUCUCG    UUCUUUGUUCAAGCA   UUUGUU AUGGUCAUCUAAGC  CAUUUUU C           CCAA               G   |||||| ||||||||||||||  ||||||| |           ||||               U   AAACAA UACCAGUAGAUUUG  GUAAAGA G           UAGC               U AC      C              UA       C CCCACAUAAGA    CAAGCUAAUAGGUUU |
Stem-loop sequence | UUUGUUUAUGGUCAUCUAAGCCAUUUUUCAUCUCGCCAAUUCUUUGUUCAAGCAGUUUUUGGAUAAUCGAACCGAUAGAAUACACCCGCAGAAAUGAUGUUUAGAUGACCAUCAACAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017756718.1 |
|
1.0 | PREDICTED: Gossypium arboreum SPX domain-containing membrane protein At4g22990 (LOC108457656), mRNA | SPX domain-containing membrane protein At4g22990(LOC108457656) | coding protein | psRNATarget |