| ncRNA ID | novel_gar_miR323 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr9:59996550-59996758 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAGAGGAAAAUAGAGGGAGAAGC - 24 |
| Stem-loop(if miRNA) |
-- C UUC A C A U UUU C UU UUCUUCCUCUAUUUUCUUC CUU UAUUUCUUUUAACGUGGUUUUUUUA UGUUUUCCAUUUGUUAAAAUUAGUCC UAA UUU UUUUAU UUGAA AA U ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||||| || AAGAGGGAGAUAAAAGGAG GAA AUAAAGGAAAUUGCAUCAAAAAGAU ACAAAAGGUAAACAAUUUUGAUUAGG GUU GAA AGAGUG AGCUU UU A CG A --- - U C C --- U UA |
| Stem-loop sequence | UUCUUCCUCUAUUUUCUUCCCUUUUCUAUUUCUUUUAACGUGGUUUUUUUAAUGUUUUCCAUUUGUUAAAAUUAGUCCCUAAAUUUUUUUUAUUUUUUGAACAAUUUAAUUUUUUCGAGUGAGACAAGCUUGUGGAUUAGUUUUAACAAAUGGAAAACAUAGAAAAACUACGUUAAAGGAAAUAAAGAGAGGAAAAUAGAGGGAGAAGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017778376.1 |
|
2.5 | PREDICTED: Gossypium arboreum probable inactive receptor kinase At1g27190 (LOC108476233), mRNA | probable inactive receptor kinase At1g27190(LOC108476233) | coding protein | psRNATarget | |||||||||
| XM_017769380.1 |
|
2.5 | PREDICTED: Gossypium arboreum receptor-like protein kinase HERK 1 (LOC108468500), mRNA | receptor-like protein kinase HERK 1(LOC108468500) | coding protein | psRNATarget |