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BaseInfo

ncRNA ID novel_gar_miR305
Species Gossypium arboreum
Class miRNA
Genome position Chr8:87758742-87758943 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588
Length 24
Mature sequence(if miRNA) 179 - AAAGGUCAUGGUCUUUAGUGGCGU - 202
Stem-loop(if miRNA) --          GU             G      GUGAAAA  -            GU   GGUCUUUCGUGGCGUUUGCUAAAAAAGCGCCGCUAAAGGUCAU
  GCCGCUAAAG  UAUGAUCUUUAGC GCGUUU       AA GCGCCGCUAAAG  UAU                                           G
  ||||||||||  ||||||||||||| ||||||       || ||||||||||||  |||
  CGGUGAUUUC  GUACUGGAAAUCG CGCGAA       GC UUUGCGGCGAUU  UCU                                           G
UG          UG             A      ---AAAA  G            --   GGUCCUGGAAAUCGCCGCGAAAAAAGCAUUUGCGGCGAUUUCU
Stem-loop sequence GCCGCUAAAGGUUAUGAUCUUUAGCGGCGUUUGUGAAAAAAGCGCCGCUAAAGGUUAUGGUCUUUCGUGGCGUUUGCUAAAAAAGCGCCGCUAAAGGUCAUGGUCUUUAGCGGCGUUUACGAAAAAAGCGCCGCUAAAGGUCCUGGUCUUUAGCGGCGUUUGCGAAAAAAGCGCAGCUAAAGGUCAUGGUCUUUAGUGGCGU