ncRNA ID | novel_gar_miR305 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:87758742-87758943 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 179 - AAAGGUCAUGGUCUUUAGUGGCGU - 202 |
Stem-loop(if miRNA) |
--          GU             G      GUGAAAA  -            GU   GGUCUUUCGUGGCGUUUGCUAAAAAAGCGCCGCUAAAGGUCAU   GCCGCUAAAG  UAUGAUCUUUAGC GCGUUU       AA GCGCCGCUAAAG  UAU                                           G   ||||||||||  ||||||||||||| ||||||       || ||||||||||||  |||   CGGUGAUUUC  GUACUGGAAAUCG CGCGAA       GC UUUGCGGCGAUU  UCU                                           G UG          UG             A      ---AAAA  G            --   GGUCCUGGAAAUCGCCGCGAAAAAAGCAUUUGCGGCGAUUUCU |
Stem-loop sequence | GCCGCUAAAGGUUAUGAUCUUUAGCGGCGUUUGUGAAAAAAGCGCCGCUAAAGGUUAUGGUCUUUCGUGGCGUUUGCUAAAAAAGCGCCGCUAAAGGUCAUGGUCUUUAGCGGCGUUUACGAAAAAAGCGCCGCUAAAGGUCCUGGUCUUUAGCGGCGUUUGCGAAAAAAGCGCAGCUAAAGGUCAUGGUCUUUAGUGGCGU |