Search result

BaseInfo

ncRNA ID novel_gar_miR304
Species Gossypium arboreum
Class miRNA
Genome position Chr8:82896609-82896665 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - UAUCAACUGUGAGAGACUCGCGGC - 24
Stem-loop(if miRNA) ---UA      -G  A     UC   GC AU
     UCAACU  UG GAGAC  GCG  U  A
     ||||||  || |||||  |||  |
     AGUUGG  AC CUCUG  UGC  A  U
GAAUA      AA  -     --   UA AA
Stem-loop sequence UAUCAACUGUGAGAGACUCGCGGCUAUAUAAAAUCGUGUCUCCAAAGGUUGAAUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017790484.1
ncRNA:24   CGGCGCUCAGAGAGUGUCAACUAU   1
  *==|-||*|||||=||||||||||
targets:1656   UUUG-GAAUCUCUUACAGUUGAUA   1678

2.5 PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 39-like (LOC108486431), mRNA DEAD-box ATP-dependent RNA helicase 39-like(LOC108486431) coding protein psRNATarget